User: Zhong JW

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Zhong JW0
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Posts by Zhong JW

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Comment: C: CAGEr : problem while filtering the bamFile
... hi, I am using CAGEr too. And  I download the bam file from FANTOM5 website. I got the same problem like you. Can you tell me how to solve the problem? > input.file <- c("G:/CAGEr1110/Mouse%20Neurons%20-%20striatal%2c%20donor3.CNhs12111.11646-122D8.mm10.nobarcode.bam") > samples <- "te ...
written 11 days ago by Zhong JW0
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a problem from import CTSStable in CAGEr
... hi, I was using CAGEr whose version is 1.24.0. Before update, I can input CTSStable and analyse, but now there is some trouble here.   > input.file1 <- "G:/CAGEr/CTSS_mouse_testis_timecourse_8_samples.txt" > samples1 <- c(paste("E", c(13,15,17), sep = ""), paste("N", c("00",10,20,30), ...
cager written 13 days ago by Zhong JW0

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