User: cmfield

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cmfield0
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Do I have too many samples or are some samples causing issues?
... I have RNASeq count data from 42 different conditions, 5 repeats per condition for a total of 210 samples, and approximately 37,000 genes. DESeq freezes up at the estimateDispersions step unless I slice the data down to ~50 samples or so. Is it the case that the calculation time scales up in the ext ...
deseq2 written 15 days ago by cmfield0 • updated 15 days ago by Michael Love20k

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