User: yurigorelik

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yurigorelik10
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7 months ago
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Posts by yurigorelik

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enrichplot packages - is there a way of dropping specific KEGG classes
... Hi, I'm using the enrichKEGG and gseKEGG functions from clusterProfiler and the visualizations functions from enrichplot namely dotplot and cnetplot and was wondering if there is way to exclude certain KEGG pathway classes from visualizations - for example exclude all pathways of class 'Human Diseas ...
clusterprofiler enrichkegg gsekegg enrichplot written 8 months ago by yurigorelik10
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Comment: C: geGeo error - Error in .subset2(x, i) : subscript out of bounds
... Thanks for the rapid reposnse, installing readr directly from github currently seems to do the trick ...
written 10 months ago by yurigorelik10
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geGeo error - Error in .subset2(x, i) : subscript out of bounds
... Hello, I was working with GEOquery,specifically with the getGEO function but it suddenly started crashing for every GSE I try to donwload unless I set the GSEMatrix to FALSE, I'm not sure what I did but I already even tried to reinstall R out of despair. This is what it looks like:   > libra ...
geoquery written 10 months ago by yurigorelik10 • updated 10 months ago by James W. MacDonald51k

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