User: Wonjong Moon

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Wonjong Moon80
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12 years, 8 months ago
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13 years, 2 months ago
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Posts by Wonjong Moon

<prev • 8 results • page 1 of 1 • next >
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Duplicated spots in limmaGUI
... Our slide design had some spots were duplicated and some were not. I am using limmaGUI, but duplicated spots were recognized by space between spots. How can I handle the spots that were not duplicated? Should add flags in spottype file and exclude those? Is there any way to combine duplicated spots ...
limmagui written 12.7 years ago by Wonjong Moon80 • updated 12.7 years ago by João Fadista500
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I would like to know how to run PRvQCHyb in arrayQuality
... I would like to know how to run PRvQCHyb in arrayQuality. I copied four gpr files into a same directory. They were from the same print run. PRv9mers() worked fine, but PRvQCHyb () had 'invalid regular expression' error. If I specified one file name, then it generated only one picture file with the ...
arrayquality written 12.8 years ago by Wonjong Moon80
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Answer: A: affylmGUI problem with tkcmd
... I downgraded R 2.4 to 2.3.1 The problem that affylmGUI halted disappeared. I pasted sessionInfo(). Thank you Wonjong. ---------------------------------------------------------------------- -- ----------------------------- > library(affylmGUI) Loading required package: limma Loading required pac ...
written 13.0 years ago by Wonjong Moon80
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affylmGUI problem with tkcmd
... I am using affylmGUI with R2.4. I have the following error tkcmd is defunct. Use tcl instead. See help ("Defunct") After this error, AffylmGUI had no response. I had to quit R. How can I solve this problem? Thank you. Wonjong. ...
affylmgui written 13.0 years ago by Wonjong Moon80
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Answer: A: Simple affymetrix question (treated vs non-treated)
... Thank you for your reply. Here, I have two different BioC codes A and B. I am comparaing Affymetrix data for 'CSA' and 'Non'. I used two different matrix design. Target file: 141PD.txt Name FileName Target CSA1 1A-1_SA1_141PD.CEL CSA CSA2 2A-1_SA2_141PD.CEL CSA CSA3 3A ...
written 13.2 years ago by Wonjong Moon80
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Simple affymetrix question (treated vs non-treated)
... An embedded and charset-unspecified text was scrubbed... Name: not available Url: https://stat.ethz.ch/pipermail/bioconductor/attachments/20061005/ 42e0c5e0/attachment.pl ...
written 13.2 years ago by Wonjong Moon80
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Limma question: positive M values means upregulated in 'Treated' in this case?
... An embedded and charset-unspecified text was scrubbed... Name: not available Url: https://stat.ethz.ch/pipermail/bioconductor/attachments/20061005/ 020c3887/attachment.pl ...
written 13.2 years ago by Wonjong Moon80 • updated 13.2 years ago by Jenny Drnevich2.2k
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Error message: no package 'file5f906952' was found
... An embedded and charset-unspecified text was scrubbed... Name: not available Url: https://stat.ethz.ch/pipermail/bioconductor/attachments/20060930/ 6fd95f6d/attachment.pl ...
written 13.2 years ago by Wonjong Moon80 • updated 13.2 years ago by James W. MacDonald52k

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