User: janani.sundaresan

Reputation:
0
Status:
New User
Last seen:
1 month, 2 weeks ago
Joined:
4 months, 1 week ago
Email:
j****************@uib.no

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by janani.sundaresan

<prev • 4 results • page 1 of 1 • next >
0
votes
0
answers
85
views
0
answers
diffbind: use of continuous variables
... How can I correct continuous variable (eg: age) in diffbind? I find that in my data age is a covariate that I need to correct for. The column TISSUE is used for AGE in my data. I tried by altering the contrast and then running dba.analyze but I get 0 peaks after blocking AGE. ``` library(DiffBind) ...
diffbind deseq2 written 3 months ago by janani.sundaresan0
0
votes
1
answer
148
views
1
answers
Comment: C: Error:no method for coercing this S4 class to a vector
... it still gives me error. The function plotGeneAnnotation() is deprecated and s4 class coercion error still persists. > plotGeneAnnotation(genomation_annot) Error in as.list.default(X) : no method for coercing this S4 class to a vector In addition: Warning message: 'plotGeneAnnotation' is dep ...
written 4 months ago by janani.sundaresan0
0
votes
1
answer
148
views
1
answers
Comment: C: Error:no method for coercing this S4 class to a vector
... > sessionInfo() R version 3.5.2 (2018-12-20) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 16.04.5 LTS Matrix products: default BLAS: /usr/lib/libblas/libblas.so.3.6.0 LAPACK: /usr/lib/lapack/liblapack.so.3.6.0 attached base packages: ...
written 4 months ago by janani.sundaresan0 • updated 4 months ago by James W. MacDonald50k
0
votes
1
answer
148
views
1
answer
Error:no method for coercing this S4 class to a vector
... Hi, I annotated my data using: genomation_annot<-genomation::annotateWithGeneParts(chip_clean.DB, gene.parts, intersect.chr = TRUE) this creates a S4 class object. from what I understood, the following functions should be able to work with this object. plotGeneAnnotation(genomation_a ...
annotation genomation written 4 months ago by janani.sundaresan0 • updated 4 months ago by altuna akalin20

Latest awards to janani.sundaresan

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 299 users visited in the last hour