User: jfo

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jfo0
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Posts by jfo

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Comment: C: kegg enrichment using clusterProfiler could not read KEGG Orthology IDs
... Is it safe to use hsa database for a non-model crustacean? I am still confused how everybody use KEGG analysis for non-model organism. Thank you for the answer! ...
written 4 months ago by jfo0
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kegg enrichment using clusterProfiler could not read KEGG Orthology IDs
... I wanted to perform the kegg enrichment method. Here's what I did: ran my fasta to kaas to get the KEGG Orthology IDs (K#####) then used these ID to perform enrichKEGG. 1. An example of the command was performed to test the function. keggID <- c("K15179", "K03377") x <- enrichKEGG(keggID, ...
clusterprofiler written 4 months ago by jfo0 • updated 11 days ago by contact0

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