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Posts by andrew.oler
... Thanks for the reply. Yes, I have already used DESeq2 to determine differentially expressed genes. I am looking for a tool to organize genes based on whether they are differentially expressed in one or more tissues. I can try your idea for dealing with replicates (average fold-change) and if I an ...
... Hi, I'm trying to use the TissueEnrich package to determine which genes are differentially responsive to a drug treatment and I'm not quite sure how to get the data into a format that will work for TissueEnrich. It appears that TissueEnrich requires a table with TPM or FPKM for each tissue. Howeve ...
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