User: david.wheeler7

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Posts by david.wheeler7

<prev • 25 results • page 2 of 3 • next >
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Comment: C: How can I install DeSeq2 in Jupyter Notebook?
... Hello Vincent. Sorry. I tried to respond yesterday but had already exceeded my limit (n=5). Great. I just installed xcode yesterday after your comment. Sounds good. Do you just want to email me @ dlinnard@berkeley.edu with a time (assuming EST) when you are ready? Thanks again! ...
written 7 months ago by david.wheeler720
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Comment: C: How can I install DeSeq2 in Jupyter Notebook?
... I can not find any more 00CLOCK* files with the search commands. Should I look via another approach? Ok Here is end the from: `BiocManager::install("BiocParallel")`. The whole log is too long to send. > BiocManager::install("BiocParallel") .... configure: error: in `/private/var/folder ...
written 7 months ago by david.wheeler720
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Comment: C: How can I install DeSeq2 in Jupyter Notebook?
... Hello Vincent. Ok sure. Your tip below did help but I still having issues updating the packages. I am in Bozeman, MT. Absolutely, whenever you have time. Please let me know. Thank you! David ...
written 7 months ago by david.wheeler720
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Comment: C: How can I install DeSeq2 in Jupyter Notebook?
... Hello Vincent. Ok sure. Your tip below did help but I still having issues updating the packages. I am in Bozeman, MT. Absolutely, whenever you have time. Please let me know. Thank you! David ...
written 7 months ago by david.wheeler720
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Comment: C: How can I install DeSeq2 in Jupyter Notebook?
... Thank you Vincent! I found and deleted the 00LOCK file and that definitely helped but I still have an issue. I am using R 3.5.1 and it seems have if the remaining packages that continuously fail to update (BiocParallel', 'httpuv', 'mongolite', 'RcppArmadillo', 'RJSONIO', 'sparklyr', 'stringi', 'XML' ...
written 7 months ago by david.wheeler720
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Comment: C: How can I install DeSeq2 in Jupyter Notebook?
... Thanks for your time and help Martin! Unfortunately, this did not work either. I received this error: ``` Bioconductor version 3.8 (BiocManager 1.30.4), R 3.5.1 (2018-07-02) Installing package(s) 'preprocessCore' Warning message in install.packages(pkgs = doing, lib = lib, repos = repos, ...): “ins ...
written 7 months ago by david.wheeler720 • updated 7 months ago by Martin Morgan ♦♦ 23k
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Comment: C: How can I install DeSeq2 in Jupyter Notebook?
... I think my version of R, 3.5.1 is too new. Can you please direct me towards a source of 3.5? ...
written 7 months ago by david.wheeler720
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Comment: C: How can I install DeSeq2 in Jupyter Notebook?
... I think my version of R, 3.5.1 is too new. Can you please direct me towards a source of 3.5? ...
written 7 months ago by david.wheeler720
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Comment: C: How can I install DeSeq2 in Jupyter Notebook?
... Sorry Martin! I promised I used the formatting you described (and the proof below looked good) but as soon as a added the comment it reverted back.`This is a test- look OK?` ...
written 7 months ago by david.wheeler720
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Comment: C: How can I install DeSeq2 in Jupyter Notebook?
... Just to be clear Nitesh, is it correct that I should run this through the terminal right? If so that I what I did but to no avail. ...
written 7 months ago by david.wheeler720

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