User: garbuzov

gravatar for garbuzov
garbuzov0
Reputation:
0
Status:
New User
Last seen:
3 hours ago
Joined:
3 months, 2 weeks ago
Email:
g*******@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by garbuzov

<prev • 3 results • page 1 of 1 • next >
0
votes
0
answers
31
views
0
answers
Incorporating factors of unwanted variation from RUVr into EdgeR cell means model for DE
... Hi there, I'm new to working with EdgeR's generalized linear models, but I have a data set where I'm trying to get complex comparisons between groups, times, and treatments, so here I am... I've figured out that the best approach for me is to use the cell means model. Right now I have two groups ...
rnaseq edger ruvseq glm ruvr written 13 days ago by garbuzov0
0
votes
1
answer
98
views
1
answers
Comment: C: Error using Conditional Quartile Normalization (CQN)
... ``` > summary(GC_content[,1]) Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 28 1286 2517 3221 4292 107966 240 ``` Are NAs a problem here? I didn't of that... Ok, got rid of NAs and it ran. Thank you! ...
written 3 months ago by garbuzov0
1
vote
1
answer
98
views
1
answer
Error using Conditional Quartile Normalization (CQN)
... Hi Everyone, I would like to use the CQN package to normalize my RNAseq data prior to network analysis. I've used edgeR and Deseq2 for differential expression analysis. I am following the ([CQN vignette][1]), and can run the analysis using their toy data set, but I am getting an error when I try to ...
rnaseq normalization cqn conditionalquartilenormalization debugging written 3 months ago by garbuzov0 • updated 3 months ago by Kasper Daniel Hansen6.4k

Latest awards to garbuzov

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 233 users visited in the last hour