User: rbutler

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rbutler0
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Posts by rbutler

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Comment: C: lfc shrinkage two factor experiment
... Thanks! I saw the refactoring and I think I understand it, but I am curious about interpreting the outcome. I can for instance relevel `genotype` on `II` and then it will become a single `coef` term, but then would the `condition effect for this re-leveled genotype II` still be the sum of the `condi ...
written 7 weeks ago by rbutler0
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lfc shrinkage two factor experiment
... Hello, I am working through the vignettes and examples for DESeq2 `?results`. I had a question(s) regarding lfcshrinkage. Looking at Example 2: ## Example 2: two conditions, two genotypes, with an interaction term dds <- makeExampleDESeqDataSet(n=100,m=12) dds$genotype <- fact ...
deseq2 lfcshrink written 7 weeks ago by rbutler0 • updated 7 weeks ago by Michael Love24k

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