User: dango147

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dango1470
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Posts by dango147

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Comment: C: Differential expression between groups with zero counts in DESEQ2
... Yeah, I've run lfcShrink with apelgm a couple times before posting here and I've seen that it effectively gets rid of them, but I was still curious. Ok, I'll stick to lfcShrink then. Thanks a lot, Michael. Your tutorials are very clear and the attention you give to this forum is really helpful ...
written 9 weeks ago by dango1470
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Differential expression between groups with zero counts in DESEQ2
... Hi guys, This is my first time posting here. I just found something weird in my analysis with DESEQ2 and I need to understand what is going on. In my dataset, I have samples from 8 early developmental stages, 5-6 biological replicates each and they all come from the same 3 mothers. I chose to use ...
deseq2 zero counts written 9 weeks ago by dango1470 • updated 9 weeks ago by Michael Love24k

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