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Posts by llmiao
... Thanks for your reply. The difference is not for a specific gene, it's about the category of the biotypes. I found some transcripts were annotated with "processed transcript" in biomaRt, while some others were annotated with "retained intron". I assume the ones that are annotated with "retained intr ...
Transcript biotypes downloaded from Biomart R package were not categorized same with Ensembl website
... Hi, I downloaded all the transcripts and annotation with biotypes from a human dataset through the Biomart R package, the listed transcript biotypes including: protein coding, processed transcript, retained intron, pseudogene, processed pseudogene, etc. When I looked at the ensembl website for tra ...
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