User: dr.aj.scott

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Differential abundance analysis of 16S data with extremely unbalanced cohorts in Deseq2
... For full disclosure I posted this question on the Phyloseq Github page but perhaps this forum is more appropriate. I have a 16S dataset from gut mucosa and want to analyse differential abundance according to a factor. I have 200 samples: 10 cases and 190 controls. Q1: is it valid to use DESeq2 to ...
deseq2 written 4 months ago by dr.aj.scott0 • updated 4 months ago by Michael Love25k

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