User: 200dumplings

gravatar for 200dumplings
Reputation:
0
Status:
New User
Last seen:
2 months, 3 weeks ago
Joined:
4 months, 3 weeks ago
Email:
2***********@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by 200dumplings

<prev • 4 results • page 1 of 1 • next >
0
votes
0
answers
250
views
0
answers
Comment: C: error in readPeakFile {chipseeker}
... Looks like the readPeakFile only takes one file at a time? I wrote a for loop to read all the files into Granges format. Yu also provided a link to use GRangesList instead, which will solve the problem https://guangchuangyu.github.io/2016/02/covplot-supports-grangeslist/ ...
written 4 months ago by 200dumplings0
0
votes
1
answer
546
views
1
answers
Comment: C: DESeq2/SummarizedExperiment RStudio shows Object With Null Pointer
... Thank you Michael! I think the object is there and is not null. Here is the output when I run dds > class: DESeqDataSet > dim: 46078 12 > metadata(1): version > assays(1): counts > rownames(46078): ENSMUSG00000028180 ENSMUSG00000028182 ... ENSMUSG00000036 ...
written 4 months ago by 200dumplings0
0
votes
1
answer
546
views
1
answers
Comment: C: DESeq2: Null Pointer Object when building dds S4 object
... Hi Michael, BiocManager::valid("DESeq2") returns TRUE. I have only encountered this problem after the R and RStudio update. ...
written 4 months ago by 200dumplings0
0
votes
1
answer
546
views
1
answer
DESeq2/SummarizedExperiment RStudio shows Object With Null Pointer
... I have been failing to build a DDS object using the function `DESeqDataSetFromMatrix()` Here is some randomly generated matrix I am using to test out if my DEseq2 package is working properly: x <- round(matrix(rexp(480 * 10, rate=.1), ncol=12), 0) rownames(x) <- paste("gene", 1:nrow ...
deseq2 rstudio summarizedexperiment null written 4 months ago by 200dumplings0 • updated 4 months ago by Martin Morgan ♦♦ 24k

Latest awards to 200dumplings

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 218 users visited in the last hour