User: Eric.Martin

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Conditional Quantile Normalization (cqn) error
... I generated a count list using featureCounts of my ATAC-seq data and fed it into R. I got the GC bias and lenght for each peak queried, and made a list for the sequencing depth. When I run the following command: atac_counts_cqn <- cqn(ataccounts0715, x = ataccovar3$gccontent, lengt ...
normalization cqn atac-seq conditionalquantilenormalization written 4 months ago by Eric.Martin0 • updated 4 months ago by Kasper Daniel Hansen6.4k

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