User: Quinten

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Quinten0
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Posts by Quinten

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Comment: C: RNA-seq time course analysis with only one experimental condition
... Hi Michael, Thanks a lot for the quick reply and I will definitely check out the plotCounts function!. One more question: If I want to directly have a look at the total longitudinal study (so include all the time points), I have to use the LRT as indicated in the vignette, chapter 9 (http://master. ...
written 3 months ago by Quinten0
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Comment: C: RNA-seq time course analysis with only one experimental condition
... Dear, I have a question related to this. Apologies if this question has already been addressed somewhere, but I couldn't find it so quickly. Your help would be very much appreciated! In my experiment, I have a group of patients (20) who all underwent a similar treatment at approximately the same ti ...
written 3 months ago by Quinten0
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Comment: C: Cannot install GO.db for R 3.6.1
... Dear Martin, Thanks again for the quick reply. It doesn't work.... I get the same error message, see below =(. Any other ideas? Just out of curiosity, what was the idea behind INSTALL_opts="--no-test-load" ? > BiocManager::install("GO.db", INSTALL_opts="--no-test-load") Bioconductor ve ...
written 3 months ago by Quinten0 • updated 3 months ago by Martin Morgan ♦♦ 24k
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Comment: C: Cannot install GO.db for R 3.6.1
... Dear Martin, Thanks for your extremely quick reply GO.db has not been installed yet (only GOstats). tempdir() is on the C:: drive of the PC, and no space in present in the path name, see below > tempdir() [1] "C:\\Users\\QRDUCA~1\\AppData\\Local\\Temp\\RtmpOwYY6B" One more thing ...
written 3 months ago by Quinten0 • updated 3 months ago by Martin Morgan ♦♦ 24k
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Cannot install GO.db for R 3.6.1
... Hi all, I've recently updated my R to the newest version (3.6.1) and updated all my packages. However, one of the functions which previously worked perfectly fine, now produces an error, as the GO.db package is not available. For some reason I cannot install the GO.db package, I've tried multiple t ...
go.db r 3.6.1 source package written 3 months ago by Quinten0 • updated 3 months ago by Martin Morgan ♦♦ 24k

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