User: amin.ghareyazi

Reputation:
0
Status:
New User
Last seen:
40 minutes ago
Joined:
2 weeks, 1 day ago
Email:
a*************@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by amin.ghareyazi

<prev • 3 results • page 1 of 1 • next >
0
votes
1
answer
40
views
1
answers
Comment: C: DESeq2 multiple group comparison (ANOVA) with batch effect
... What is your opinion on fourth plot? Do you think group 2 with only 10 samples (297 samples in other groups) can cause these significant p-values and batch effects have no role in this? ...
written 40 minutes ago by amin.ghareyazi0
0
votes
1
answer
40
views
1
answers
Comment: C: DESeq2 multiple group comparison (ANOVA) with batch effect
... Thanks for your fast and precise reply Michael. Do you mean that differences are statistically significant but they are not observable in these plots? and the results are well adjusted for batch effect? I can't see differences in plotCounts for groups (third plot) but there are observable difference ...
written 1 hour ago by amin.ghareyazi0
0
votes
1
answer
40
views
1
answer
DESeq2 multiple group comparison (ANOVA) with batch effect
... Hi I'm using DESeq2 to analyze raw read counts. I have 5 groups and 3 batches (different projects). In order to find out which genes are expressed differentially in all groups and also adjust for batch effects I conducted the LRT test step by step from the guideline. This is my code: rna.o=DESeqDa ...
deseq2 anova batch effect deg comparison written 4 hours ago by amin.ghareyazi0 • updated 3 hours ago by Michael Love24k

Latest awards to amin.ghareyazi

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 338 users visited in the last hour