User: Alex Tsoi

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Alex Tsoi260
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Posts by Alex Tsoi

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Quantile Normalization on log ratio data (cDNA) from SOFT formatted- data give weired result
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written 11.9 years ago by Alex Tsoi260
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Reading the Affymetrix data as .txt data (from GEO)
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written 11.9 years ago by Alex Tsoi260 • updated 11.9 years ago by Sean Davis21k
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Question on SAM output
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written 12.0 years ago by Alex Tsoi260 • updated 12.0 years ago by Holger Schwender900
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The mis-match platform read by bioconductor --> MOE430B
... Dear All, I am wondering how does the bioconductor know what platforms the .cel files come from when reading the raw data by using eg. ReadAffy() or even justGCRMA(). I have several raw .cel files downloaded from GEO, and they are supposed to be from the MOE430B, however, when I used either ReadAf ...
moe430a moe430b written 12.0 years ago by Alex Tsoi260 • updated 12.0 years ago by Ben Bolstad1.2k
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YGS98 package does not provide locus link ID information ?
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written 12.1 years ago by Alex Tsoi260 • updated 12.1 years ago by James W. MacDonald51k
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Annotation package for Yeast Genome S98 array ?
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written 12.1 years ago by Alex Tsoi260 • updated 12.1 years ago by John Zhang2.9k
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SAM vs. sam2.20
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written 12.2 years ago by Alex Tsoi260 • updated 12.2 years ago by Holger Schwender900
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Problem when comparing a large experimental group versus a small control group by using SAM
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written 12.2 years ago by Alex Tsoi260
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How could I interpret a SAM result like this ?
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written 12.2 years ago by Alex Tsoi260
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The criteria to be used in a meta-study by using SAM
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written 12.3 years ago by Alex Tsoi260 • updated 12.3 years ago by Naomi Altman6.0k

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