User: Ana Conesa

gravatar for Ana Conesa
Ana Conesa340
Reputation:
340
Status:
Trusted
Location:
Last seen:
7 years, 4 months ago
Joined:
12 years, 3 months ago
Email:
a******@cipf.es

Posts by Ana Conesa

<prev • 34 results • page 2 of 4 • next >
0
votes
2
answers
628
views
2
answers
Answer: A: Annotation for Medicago array (Affy)
... Dear Guido The Blast2GO Functional Annotation Repository http://blast2go.bioinfo.cipf.es/b2gfar contains GO annotations for 17 non-model species Affymetrix GeneChip's, including Medicago. You can use the annotation simply as such or in combination with Blast2GO for analysis purposes (enrichment,vis ...
written 10.5 years ago by Ana Conesa340
0
votes
1
answer
1.1k
views
1
answers
Answer: A: Analysis of Time-Series Microarray Data
... Dear Paco, You might want to have a look at the maSigPro package. The maSigPro method uses regression to analyze time-series data. The program allows you to choose a polynomical degree to model more or less complex patterns. You have many time points and no replication and this is in principle OK f ...
written 10.6 years ago by Ana Conesa340
0
votes
2
answers
839
views
2
answers
function for translation of ORFs
... Dear list, Can someone indicate a R function for translating an open reading frame into a protein sequence? Thanks Ana ...
written 10.8 years ago by Ana Conesa340 • updated 10.8 years ago by Hervé Pagès ♦♦ 14k
0
votes
0
answers
686
views
0
answers
CAMDA08 Announcement. Deadline extension
... Dear Colleagues, Because of the fairly late release of the second contest data set we have had many requests for a deadline extension. We have thus decided to push back the deadline for all papers by two more weeks to 22 October. For fairness towards already submitted manuscripts, past submissions ...
microarray arrayexpress written 10.9 years ago by Ana Conesa340
0
votes
1
answer
336
views
1
answer
R package to estimate aggregation of NGS reads
... Dear list, I was wondering if anyone knows a R package or function to investigate distribution of next-generation sequencing mapping data on chromosomes and find regions with a significant aggregation of mapped reads. Cheers Ana ...
sequencing written 10.9 years ago by Ana Conesa340 • updated 10.9 years ago by Martin Morgan ♦♦ 23k
0
votes
0
answers
486
views
0
answers
CAMDA08 Announcement
... CAMDA'08, Vienna, Austria, 4-6 December 2008 -- http://camda.bioinfo.cipf.es/ News: ** Emerald calibration data set released! ** News: ** CAMDA is featured in the August Nature Methods editorial! ** Dear colleague! We cordially invite you to attend this year's conference on Critical As ...
microarray written 11.0 years ago by Ana Conesa340
0
votes
2
answers
1.7k
views
2
answers
Answer: A: Finding genes with significant linear regression or trend
... Dear Daniel You could have a look into the maSigPro package. It consider time or any other continuous variable as such and indentifies genes with significant changes their expression trend for one or more than one series. Best regards Ana Conesa Daniel Brewer wrote: > What is the best way in ...
written 11.3 years ago by Ana Conesa340
0
votes
1
answer
723
views
1
answers
Answer: A: maSigPro Problems in see.genes
... Hi Marcelo You should be running the see.genes function as: > see.genes(sigs$sig.genes$Time, ...) or > see.genes(sigs$sig.genes$Time2, ...) etc. Hope this helps Ana Marcelo Laia wrote: > Dear, > > We have a Single Series Time Course and we would like to analyse it on maSigP ...
written 11.5 years ago by Ana Conesa340
0
votes
0
answers
609
views
0
answers
SECOND ANNOUNCEMENT: IV International Course on Microarray Data Analysis
... hits=-2.6 tests=BAYES_00 X-USF-Spam-Flag: NO Dear Colleague, We are pleased to announce the IV International Course on Microarray Data Analysis to be held at the CIPF (Valencia) in March 2008. The course provides theoretical and practical lectures on the use of user-friendly web tools for the ana ...
0
votes
1
answer
505
views
1
answer
errors with read.maimages
... Dear List, I am getting a couple of erros when trying to import gpr files using the read.maimages of Limma RG1<-read.maimages(targets1,source="genepix") Error in sub(pattern, replacement, x, ignore.case, extended, fixed, useBytes) : input string 1 is invalid in this locale In this cas ...
written 11.7 years ago by Ana Conesa340 • updated 11.7 years ago by Martin Morgan ♦♦ 23k

Latest awards to Ana Conesa

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 240 users visited in the last hour