User: Cindy

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Cindy0
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Posts by Cindy

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about DESeq2 analysis on time series data
... I have time series data from two gene background: 1) if I want to compared 0 hour first in each background and then see how is the difference between two gene background at all other time point(1h and 4h which already removed the effect of 0h), in other word, I do not want to know the diffe ...
deseq2 written 5 days ago by Cindy0
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Comment: C: DEseq2 analysis time-series data under two conditions
... Yes, thank you. I am not computer people, looks I need help from bioinformatics group. Thank you again. ...
written 5 days ago by Cindy0
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Comment: A: DEseq2 analysis time-series data under two conditions
... Thank you so much. I am reading the workflow now. And I am trying to apply my count data in it, but now I can not even get the count data into DESeq2. My count matrix is txt file and each row represents an gene, each column represents a sample. ...
written 5 days ago by Cindy0
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DEseq2 analysis time-series data under two conditions
... I have time series data from two condition, like 0h, 2h, and 6h by treatment A and B. I want to know FDR different between A and B at 1h fold change for example compared with their individual 0h. in other word, I want to subtract 0h expression first and then compare the two 1h secondly (take 1h for ...
deseq2 written 5 days ago by Cindy0

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