User: Ankit

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Ankit0
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Posts by Ankit

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Comment: C: DESeq2: Normalization of allele specific counts in RNA-seq
... Hi Sir, If you have any suggestions please let me know. I don't know how to proceed. I thought for some possible approaches to get normalized count matrix as I mentioned in reply. I am not sure if these approaches are appropriate. Please help. Thank you ...
written 10 weeks ago by Ankit0
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Comment: C: DESeq2: Normalization of allele specific counts in RNA-seq
... Thank you sir for the reply. I agree with your valuable suggestions. I was thinking an alternative approach to get normalized count matrix. May be you can correct me on this. So I have two types of matrix. One with allele-specific counts (eg. Sample1 - allele1, allele2) and other before splitting ( ...
written 11 weeks ago by Ankit0
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Comment: C: Normalization of allele specific counts in RNA-seq
... Hi everyone, Any suggestion would be helpful. Thanks ...
written 11 weeks ago by Ankit0
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DESeq2: Normalization of allele specific counts in RNA-seq
... Hi everyone, I am posting here about the normalization of allele-specific counts in RNA-seq . I have previously asked this [question][1] at another platform. And finally reached here after the suggestion. I have read [this][2] manual by Deseq2 author. This is very well written manual on how to use ...
rnaseq normalization deseq2 allele-specific written 11 weeks ago by Ankit0 • updated 11 weeks ago by Michael Love26k

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