User: jrager

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jrager0
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Posts by jrager

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Comment: C: Switching RNAseq count data to explanatory variable?
... Great- this confirms our thoughts. Thank you for the feedback! ...
written 13 days ago by jrager0
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Comment: C: Switching RNAseq count data to explanatory variable?
... Great- this confirms our thoughts. Thank you for the feedback! ...
written 13 days ago by jrager0
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Comment: C: Switching RNAseq count data to explanatory variable?
... Thank you for the response. This is a more general question for several ongoing projects - we have a large sample count (~500) from human tissue. We are trying to evaluate relationships between gene expression signatures and various epidemiology-based outcomes. For instance, does the expression leve ...
written 14 days ago by jrager0
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Switching RNAseq count data to explanatory variable?
... I am trying to figure out if there is a way to modify the design formula such that countData are used as the "effect" / explanatory variable, and another outcome is used as the dependent variable, while adjusting for covariates. So, I'm trying to switch: countData ~ covariate1 + covariate2 + outcom ...
deseq2 written 14 days ago by jrager0 • updated 14 days ago by Michael Love25k

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