User: ludmi.b

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ludmi.b0
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Posts by ludmi.b

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Answer: A: Different number of marker genes between same clusters
... Thanks for the advice, next time I'll be sure to show the code - and yes, I was talking about `scran::findMarkers`. Your explanation was very clear and helpful. Actually, it does not make sense to expect symmetry between the marker lists if DE comparisons are performed between pairs of clusters. ...
written 10 weeks ago by ludmi.b0
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Different number of marker genes between same clusters
... Dear all, I'm analyzing some single cell data using Single Cell Experiment package. I'm trying to detect marker genes between clusters using the **findMarkers()** function. In particular, I wanted to check how many marker genes there are between cluster 3 and 7, which have *FDR* < 0.01 and a *L ...
single cell de clusters sce markers written 10 weeks ago by ludmi.b0

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