User: roshniroy16

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Posts by roshniroy16

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Comment: C: Assembly report error for hg19 in GenomeInfoDb
... I will definitely get in touch with the help desk. Thank you for your feedback. ...
written 11 days ago by roshniroy160
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Comment: C: Assembly report error for hg19 in GenomeInfoDb
... Thank you for your reply Martin. When I type the commands- ``` url = "ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/405/" xx = RCurl::getURL(url) cat(xx) ``` I get this HUUGE list of comments- (reduced a few lines due to space constraints) ``` Directory: ftp://ftp.ncbi.nlm.nih.gov/genomes/a ...
written 11 days ago by roshniroy160 • updated 11 days ago by Martin Morgan ♦♦ 24k
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Assembly report error for hg19 in GenomeInfoDb
... I am working with HTGTS Transloc-pipeline. While working with the example dataset, I managed to run the first two steps (TranslocPreprocess.pl and TranslocWrapper.pl) and got the desired output files (tlx files) TranslocPreprocess.pl tutorial_metadata.txt preprocess/ --read1 pooled_R1.fq.gz --read2 ...
genomeinfodb software error htgts transloc-pipeline translochotspots.r written 7 weeks ago by roshniroy160 • updated 11 days ago by Martin Morgan ♦♦ 24k

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