User: eduardogccm

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Posts by eduardogccm

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Comment: C: Very variable samples vs similar samples in the same dataset
... Ok, I didn't notice it in the FAQs, found it now!. Thanks for pointing me back there and for taking the time for answering. ...
written 27 days ago by eduardogccm0
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Comment: C: Very variable samples vs similar samples in the same dataset
... Hi. Yes, I am aware of that. From my understanding, adding all the samples in the DESeqDataSet (or edgeR equivalent) is better and provides more power (and that is what I have seen before working with microarray data in limma). However, in this case I got basically no differentially expressed genes ...
written 28 days ago by eduardogccm0
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Very variable samples vs similar samples in the same dataset
... Hi! I am not sure if the following question has already been answered, but I haven't found it. Sorry if it is a reapeated question. I am currently analysing a bulk RNAseq dataset. It contains 18 samples from 3 different patients (6 conditions per patient; 3 cell types and treatment/no-treatment). ...
edger deseq2 written 4 weeks ago by eduardogccm0 • updated 28 days ago by Michael Love26k

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