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1.8k
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Answer:
C: GO-terms delivered by GOstats hyperGTest() do not exist in my universe
7.0 years ago
Jenny Drnevich
★ 2.0k
1
vote
0
replies
1.1k
views
Answer:
A: Plotting Gene Expression Data From Multiple Batches
7.3 years ago
Jenny Drnevich
★ 2.0k
5
votes
1
reply
14k
views
Answer:
C: Limma: how to get same output as topTable but for all the genes ?
updated 7.8 years ago by
Gordon Smyth
51k • written 16.0 years ago by
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.5k
views
Answer:
A: Problem after upgrading from affycoretools 1.46.1 to 1.46.3; "vfs customization
7.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
14k
views
Answer:
A: Problem with installation of org.Hs.eg.db
8.0 years ago
Jenny Drnevich
★ 2.0k
1
vote
1
reply
2.7k
views
Answer:
A: Find if a covariate has effect on gene expression level using edgeR and DESeq2
8.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.1k
views
Answer:
A: Missing binaries for AnnotationData packages?
8.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.4k
views
Answer:
A: Collation of differentially expressed genes in Limma
8.8 years ago
Jenny Drnevich
★ 2.0k
1
vote
0
replies
1.9k
views
Answer:
A: edgeR data analysis question
updated 9.5 years ago by
Gordon Smyth
51k • written 9.5 years ago by
Jenny Drnevich
★ 2.0k
1
vote
0
replies
2.8k
views
Answer:
A: discrepance in DESeq2 results with different design structures
9.5 years ago
Jenny Drnevich
★ 2.0k
1
vote
1
reply
15k
views
Answer:
A: Problems updating Bioconductor with R 3.2.0
9.6 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.4k
views
Answer:
A: Missing as.list generic from AnnotationDbi?
10.1 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.2k
views
Answer:
A: 2 way anova in Bioconductor
13.4 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.5k
views
Answer:
A: Comparing Two Affymetrix Arrays Question
13.4 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.5k
views
Answer:
A: Comparing Two Affymetrix Arrays Question
13.4 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.5k
views
Answer:
A: Comparing Two Affymetrix Arrays Question
13.4 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.5k
views
Answer:
A: analysis of reference design with even dye-swap across biological replicates
13.4 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.2k
views
Answer:
A: goseq: gene universe
13.6 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.6k
views
Answer:
A: Detection calls and LIMMA
13.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.5k
views
Answer:
A: Using Limma for common reference and paired samples
13.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.5k
views
Answer:
A: Using Limma for common reference and paired samples
13.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.6k
views
Answer:
A: question regarding removing probes/probe sets before normalization
14.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.6k
views
Answer:
A: question regarding removing probes/probe sets before normalization
14.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.6k
views
Answer:
A: question regarding removing probes/probe sets before normalization
14.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.2k
views
Answer:
A: Limma: topTable without eBayes?
14.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.1k
views
Answer:
A: Nested Design (Again) & Subset WithinArray Correlation
14.3 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.1k
views
Answer:
A: Heatmap: row labels & dendogram
14.6 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
3.7k
views
Answer:
A: problems when trying to use biomaRt
14.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
3.7k
views
Answer:
A: problems when trying to use biomaRt
14.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
3.7k
views
Answer:
A: problems when trying to use biomaRt
14.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
784
views
Answer:
A: FW: Problem in masking individual probes to calculate expression values
14.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.2k
views
Answer:
A: question about lmFit model
14.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
650
views
Answer:
A: R versions 2.10 : simple error, joke or truly intended ?
14.9 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.4k
views
Answer:
A: Correlation analysis of replicates
15.0 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
918
views
Answer:
A: Does hist (affy) function work on probe-pair values or probe-set values?
15.1 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.8k
views
Answer:
A: Error while trying to use Genefilter
15.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.0k
views
Answer:
A: question about topTable ranking of limma
15.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.0k
views
Answer:
A: question about topTable ranking of limma
15.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.5k
views
Answer:
A: venn diagram
15.3 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.4k
views
Answer:
A: How to install Rgraphviz on Windows - REALLY!
15.4 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.1k
views
Answer:
A: intraSpotCorrelation consensus values for Single Channel analysis in limma
15.5 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.1k
views
Answer:
A: limma: duplicates handling
15.6 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.6k
views
Answer:
A: genefilter displaying the expression set
15.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.7k
views
Answer:
A: two color arrays normalization
15.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.7k
views
Answer:
A: two color arrays normalization
15.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.7k
views
Answer:
A: two color arrays normalization
15.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
799
views
Answer:
A: Confusing results
15.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.7k
views
Answer:
A: two color arrays normalization
15.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.1k
views
Answer:
A: ...another question about using weights on microarray analysis
15.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.2k
views
Answer:
A: Limma without eBayes correction
15.8 years ago
Jenny Drnevich
★ 2.0k
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