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1
vote
1
reply
1.7k
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Comment:
Comment: Accounting for Batch effect reduces DEGs drastically
12 months ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
836
views
Comment:
Comment: Reopened: 'Omics data analyst for HPCBio, University of Illinois
21 months ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
5.4k
views
Comment:
Comment: Easy way to turn OrgDb object from AnnotationHub into package?
2.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.1k
views
Comment:
Comment: 'Omics data analyst for HPCBio, University of Illinois
2.3 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.4k
views
Comment:
Comment: Problem in kegga() and others getting data from KEGG after switch from http to h
2.4 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.6k
views
Comment:
C: Can't select GO from AnnotationHub orgDB packages
4.3 years ago
Jenny Drnevich
★ 2.0k
1
vote
0
replies
2.7k
views
Comment:
C: How to manage AnnotationHub snapshots / most OrgDB are missing?
4.5 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.4k
views
Comment:
C: Issues with normalizing viral-infected single cell data
4.6 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.4k
views
Comment:
C: Issues with normalizing viral-infected single cell data
4.6 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.3k
views
Comment:
C: BioC2018 Workshop book not linked from Bioconductor.org?
5.6 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.6k
views
Comment:
C: Change default prior.count in glmFit() to match cpm(), aveLogCPM(), etc?
6.0 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.9k
views
Comment:
C: Bioconductor 3.8 is released
updated 6.0 years ago by
Martin Morgan
25k • written 6.0 years ago by
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.9k
views
Comment:
C: Bioconductor 3.8 is released
6.0 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
5.4k
views
Comment:
C: Easy way to turn OrgDb object from AnnotationHub into package?
6.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.2k
views
Comment:
C: csaw: how to hack filtering windows by negative input controls?
6.3 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.5k
views
Comment:
C: bug in estimateDisp() or mistake in documentation?
updated 6.4 years ago by
Gordon Smyth
51k • written 10.3 years ago by
Jenny Drnevich
★ 2.0k
1
vote
0
replies
1.2k
views
Comment:
C: Hotels for BioC 2018?
6.6 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.2k
views
Comment:
C: Hotels for BioC 2018?
updated 6.6 years ago by
Martin Morgan
25k • written 6.6 years ago by
Jenny Drnevich
★ 2.0k
0
votes
0
replies
951
views
Comment:
C: Support site search not finding posts?
6.7 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
3.2k
views
Comment:
C: Problem with tximport(reader = read_tsv) and workaround
6.9 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.9k
views
Comment:
C: EGSEA generateReport() error "no adj nodes"
6.9 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.9k
views
Comment:
C: EGSEA generateReport() error "no adj nodes"
6.9 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.9k
views
Comment:
C: EGSEA generateReport() error "no adj nodes"
6.9 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
3.0k
views
Comment:
C: Problem using biocLite() to update packages
7.0 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.8k
views
Comment:
C: GO-terms delivered by GOstats hyperGTest() do not exist in my universe
7.0 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.6k
views
Comment:
C: tximport recommendation for limma-trend downstream analysis?
7.1 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.6k
views
Comment:
C: tximport recommendation for limma-trend downstream analysis?
7.1 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.6k
views
Comment:
C: prior.prob has opposite effects in goana and kegga?
7.3 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.2k
views
Comment:
C: raw probe set expression data and masking questions
7.6 years ago
Jenny Drnevich
★ 2.0k
1
vote
0
replies
1.9k
views
Comment:
C: goseq Error: could not find function "supportedOrganisms"
7.6 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.2k
views
Comment:
C: raw probe set expression data and masking questions
7.6 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
5.4k
views
Comment:
C: Easy way to turn OrgDb object from AnnotationHub into package?
7.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
5.4k
views
Comment:
C: Easy way to turn OrgDb object from AnnotationHub into package?
7.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.4k
views
Comment:
C: How to define contrasts for expression changes over time
7.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.5k
views
Comment:
C: Problem after upgrading from affycoretools 1.46.1 to 1.46.3; "vfs customization
7.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.6k
views
Comment:
C: How to remove nested batch effects with removeBatchEffect?
8.1 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
4.6k
views
Comment:
C: voom + removeBatchEffect + gene clustering
8.1 years ago
Jenny Drnevich
★ 2.0k
1
vote
1
reply
4.6k
views
Comment:
C: voom + removeBatchEffect + gene clustering
8.1 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
3.2k
views
Comment:
C: Problem with tximport(reader = read_tsv) and workaround
8.1 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
3.2k
views
Comment:
C: Problem with tximport(reader = read_tsv) and workaround
8.1 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.5k
views
Comment:
C: Problems with running limma voom on subsets of genes from WGCNA modules?
8.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.7k
views
Comment:
C: Find if a covariate has effect on gene expression level using edgeR and DESeq2
8.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.6k
views
Comment:
C: AnnotationHub's NCBI OrgDB have older EGSOURCEDATE than org.Xy.eg.db?
8.2 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.2k
views
Comment:
C: bug in Glimma - anno can't have T/F
8.4 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.1k
views
Comment:
C: Missing binaries for AnnotationData packages?
updated 8.7 years ago by
James W. MacDonald
67k • written 8.7 years ago by
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.1k
views
Comment:
C: Missing binaries for AnnotationData packages?
updated 8.7 years ago by
Dan Tenenbaum
★ 8.2k • written 8.7 years ago by
Jenny Drnevich
★ 2.0k
0
votes
0
replies
6.6k
views
Comment:
C: sva + egdeR - differential expression analysis - RNA-seq data
8.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
12k
views
Comment:
C: trouble using select() to get all GO terms when have duplicate query IDs
updated 9.0 years ago by
Martin Morgan
25k • written 9.0 years ago by
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.5k
views
Comment:
C: rtracklayer v1.30.0 can no longer import gff files
9.0 years ago
Jenny Drnevich
★ 2.0k
0
votes
0
replies
2.4k
views
Comment:
C: design matrix for cross-over + repeated measures in limma?
9.1 years ago
Jenny Drnevich
★ 2.0k
114 results • Page
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