User: Jenny Drnevich

gravatar for Jenny Drnevich
Jenny Drnevich1.9k
Reputation:
1,900
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Location:
United States
Last seen:
3 weeks, 3 days ago
Joined:
10 years, 6 months ago
Email:
d*******@illinois.edu

I work for the High Performance Biological Computing group (HPCBio) in the Carver Biotechnology Center at the University of Illinois, which is a core service center providing state-of-the-art infrastructure for genomic and proteomic research. My areas of expertise are statistical analyses of gene expression data from microarrays and RNA-Seq and post-analysis data mining. I also teach a a recurring workshop on how to analyze and data mine gene expression data.

Posts by Jenny Drnevich

<prev • 265 results • page 2 of 27 • next >
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Job: EXTENDED: Bioinformatics Specialist at the University of Illinois
... We are interested in hiring another analyst that is familiar with handling, processing and analyzing next generation sequencing data. Preference would be for someone with metagenomics/microbiome or epigenomics/bisulfite-Seq to fill out our expertise repertoire, but we would consider anyone with expe ...
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Comment: C: Support site search not finding posts?
... Thanks, Jim! I'll just google from now on. ...
written 10 months ago by Jenny Drnevich1.9k
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Support site search not finding posts?
... Hi, I just had a weird issue with https://support.bioconductor.org/'s search function. I was trying to find an old post I had made to see the recommendations but the search function wasn't coming up with anything. I searched "tximport limma-trend" (words I knew I had put in the title) but the searc ...
search tximport limma-trend written 10 months ago by Jenny Drnevich1.9k • updated 10 months ago by James W. MacDonald48k
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Job: Bioinformatics Specialist at the University of Illinois
... The Roy J. Carver Biotechnology Center has an opening for a Visiting Research Specialist in Life Science in HPCBio. The primary function of the position is to process and analyze 'omics data produced by customers of the HPCBio group. This position is a one year commitment with the potential for ren ...
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Comment: C: Problem with tximport(reader = read_tsv) and workaround
... Thanks - I'll try it out soon! ...
written 12 months ago by Jenny Drnevich1.9k
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Comment: C: EGSEA generateReport() error "no adj nodes"
... Hi Monther, I had updated all my packages in the last week or two, but I went ahead and updated again today but still had the same error with EGSEA 1.6.0. The new version hasn’t been pushed through yet, but I’ll check again tomorrow. Thanks for getting a workaround done so fast! It is weird that yo ...
written 12 months ago by Jenny Drnevich1.9k
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Comment: C: EGSEA generateReport() error "no adj nodes"
... Thanks! Please let me know when the bug is fixed. Jenny From: Monther Alhamdoosh [bioc] [mailto:noreply@bioconductor.org] Sent: Thursday, November 30, 2017 7:01 PM To: Zadeh, Jenny Drnevich <drnevich@illinois.edu> Subject: [bioc] A: EGSEA generateReport() error "no adj nodes" Activity on a ...
written 12 months ago by Jenny Drnevich1.9k
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Comment: C: EGSEA generateReport() error "no adj nodes"
... Update: I tried running the example mouse data in the EGSEA123 workflow and had the same error right at the Build GO DAG topology step: > generateReport(gsa, number = 20, report.dir="./") EGSEA HTML report is being generated ... ##------ Thu Nov 30 16:29:59 2017 ------## Number of used cores ...
written 12 months ago by Jenny Drnevich1.9k
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EGSEA generateReport() error "no adj nodes"
... Hello, I am running through the EGSEA123 workflow, except I am using my own human data, consisting of 14K Entrez IDs, all of which are in org.Hs.eg.db. Everything goes fine until I try to generate the report when I get an error during the Build GO DAG topology and some additional warnings: librar ...
egsea egsea123 written 12 months ago by Jenny Drnevich1.9k • updated 12 months ago by Monther Alhamdoosh40
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Comment: C: Problem using biocLite() to update packages
... Yep, stupid Windows! That must be the cause of the random packages not being able to update. I’ll try to remember to shut down my CrashPlan before updating in the future. Cheers, From: James W. MacDonald [bioc] [mailto:noreply@bioconductor.org] Sent: Friday, November 10, 2017 4:20 PM To: Zadeh, Je ...
written 13 months ago by Jenny Drnevich1.9k

Latest awards to Jenny Drnevich

Popular Question 6 weeks ago, created a question with more than 1,000 views. For Problem with tximport(reader = read_tsv) and workaround
Popular Question 6 weeks ago, created a question with more than 1,000 views. For goseq KEGG testing?
Popular Question 7 months ago, created a question with more than 1,000 views. For trouble using select() to get all GO terms when have duplicate query IDs
Popular Question 18 months ago, created a question with more than 1,000 views. For biocLite() fails to update packages when main library not writable
Great Question 18 months ago, created a question with more than 5,000 views. For biocLite() fails to update packages when main library not writable
Popular Question 21 months ago, created a question with more than 1,000 views. For biocLite() upgrade issue when same package in 2 libraries
Popular Question 2.8 years ago, created a question with more than 1,000 views. For biocLite() upgrade issue when same package in 2 libraries
Popular Question 2.8 years ago, created a question with more than 1,000 views. For biocLite() fails to update packages when main library not writable
Popular Question 3.4 years ago, created a question with more than 1,000 views. For biocLite() fails to update packages when main library not writable
Autobiographer 4.2 years ago, has more than 80 characters in the information field of the user's profile.
Centurion 4.4 years ago, created 100 posts.

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