User: Elin Axelsson

gravatar for Elin Axelsson
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Last seen:
10 years, 3 months ago
Joined:
11 years, 4 months ago
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e***@ebi.ac.uk

Posts by Elin Axelsson

<prev • 6 results • page 1 of 1 • next >
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Comment: C: cellHTS2 readPlateList
... Try if it works if you add .txt like: Filename Plate Replicate Plate1Replicate1.txt 1 1 Plate1Replicate2.txt 1 2 Plate2Replicate1.txt 2 1 as that's how you call your files in the data folder best, Elin Jose Garcia-Bernardo wrote: > Something like this: > ...
written 10.3 years ago by Elin Axelsson60
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Comment: C: cellHTS2 readPlateList
... hmm, maybe a stupid question but how does your "platelist.txt" look? Elin Jose Garcia-Bernardo wrote: > Thank you to both for your quick replies! > > Yes, indeed are all files in the folder of the specified path and I changed > twice the path to make sure it was the right one. However ...
written 10.3 years ago by Elin Axelsson60
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Answer: A: cellHTS2 readPlateList
... Hi Jose, are you sure your files are where your dataPath says the are ( "/Documents and Settings/.. Screen/in" ) ? how did you set the dataPath? best, Elin Jose Garcia-Bernardo wrote: > Dear all > > A very basic question from a complete beginner. > > > > I'm getting an err ...
written 10.3 years ago by Elin Axelsson60
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Answer: A: A list, a matrix and impute.knn for making data for SAMR
... Hi John, if you look in ?impute.knn under the "value" section you will see that function returns 3 things; the data matrix, the rng.seed and the rng.state. It's returned as list, as you noticed, if you want the data matrix you simply write imputed_data$data. Hope this helps, Elin John Herbert wr ...
written 10.3 years ago by Elin Axelsson60
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Answer: A: Definition of the CellHTS2 normalizePlates parameter scale
... Hi Cor, I hope I can help you out here. Let me know if it doesn't makes sense. On the additive scale you look at how much something adds to an effect, whereas on the multiplicative scale you look for how much something multiply the effect. Eg, in a viability screen, if you set the scale to be add ...
written 11.2 years ago by Elin Axelsson60
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Answer: A: Error in RCurl and GEOquery installation
... Hi Amin, Are you sure you have libcurl installed? Best wishes, Elin Momin, Amin A wrote: > When I try installing RCurl package for the installation of GEOquery in RHEL5 I get the following error. > I would be happy if some one can give me suggestion to solve this. > > >> install ...
written 11.4 years ago by Elin Axelsson60

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