User: Oura Tomonori

gravatar for Oura Tomonori
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10 years, 9 months ago
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11 years, 1 month ago
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Posts by Oura Tomonori

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fail combineAffyBatch for many files
... Dear BioC, I tested the combineAffyBatch function in the matchprobes library to merge data from HG-U133A and HG-U133Av2 GeneChips, which seemed to work well for small number of arrays. > f1 <- list.files(path=dir1,".CEL",ignore.case=T,full.name=T)[1] > f1file <- list.files(path=dir1, ...
cdf matchprobes written 10.8 years ago by Oura Tomonori30 • updated 10.8 years ago by Wolfgang Huber13k
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Comment: C: How are GO2PROBE built
... Hi Sean Thank you for general information about current annotation mapping systems. But, I want to know the specific information about building process of metadata like, how to omit the gene ontology terms with redundant or poor information, like the description of MSigDB C5 collection bellow, &g ...
written 11.1 years ago by Oura Tomonori30
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How are GO2PROBE built
... Dear BioC, How are the mappings of Affymetrix probe ids to Gene Ontology terms in metadata package provided by Bioconductor build? I am trying to use some gene set analysis packages and find some pakage use the *GO2PROBE (ex. hgu133aGO2PROBE) information, but another package use the external gene ...
go probe annbuilder written 11.1 years ago by Oura Tomonori30 • updated 11.1 years ago by Sean Davis21k

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