User: Priscila Darakjian

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Posts by Priscila Darakjian

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Comment: C: Normalize data across platforms
... Maybe this will help you regarding control probes across platforms --> https://aberdeen.ac.uk/ims/facilities/microarray/documents/chipcontrol s.doc Regards Priscila -----Original Message----- From: bioconductor-bounces@stat.math.ethz.ch [mailto:bioconductor- bounces@stat.math.ethz.ch] On Behal ...
written 10.0 years ago by Priscila Darakjian40
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Comment: C: Newbie Illumina Probe Annotation (beadarray) Problem
... I haven't used the illuminaMousev1p1.db. However, and maybe this might help you to go in the right direction, the Illumina annotation files have a column named "Probe_ID." This id is supposed to identify the specific probe sequence across arrays (if you compare across arrays you will see that, for a ...
written 10.2 years ago by Priscila Darakjian40
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Comment: C: Newbie Illumina Probe Annotation (beadarray) Problem
... Actually, I would look at MouseRef-8_V1_1_R3_11234312_A.bgx (this probably has some annotation changes that were not present in R1) -----Original Message----- From: bioconductor-bounces@stat.math.ethz.ch [mailto:bioconductor- bounces@stat.math.ethz.ch] On Behalf Of Priscila Darakjian Sent: Thursday ...
written 10.2 years ago by Priscila Darakjian40
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Answer: A: Newbie Illumina Probe Annotation (beadarray) Problem
... Look at http://www.switchtoi.com/annotationprevfiles.ilmn I believe you will be interested specifically in either of these two files: MouseRef-8_V1_1_R3_11234312_A.bgx (this is revision 3) MouseRef-8_V1_1_R1_11234312_A.bgx Good luck, Priscila -----Original Message----- From: bioconductor-bounces ...
written 10.2 years ago by Priscila Darakjian40

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