User: P Darakjian

gravatar for P Darakjian
P Darakjian40
Reputation:
40
Status:
New User
Location:
Last seen:
5 days, 18 hours ago
Joined:
10 years, 8 months ago
Email:
d*******@ohsu.edu

Posts by P Darakjian

<prev • 6 results • page 1 of 1 • next >
0
votes
0
answers
275
views
0
answers
Comment: C: Error in saving diffmeth data
... I have managed to complete the analysis once I inspected the sample annotation file for issues with tabs vs spaces. I also added the column "Sample\_Name" in addition to "Sample\_ID" (Sample\_IDs are the names of the bed files for each sample). You also must inspect the rnb.options to make sure the ...
written 17 days ago by P Darakjian40
0
votes
0
answers
275
views
0
answers
Comment: C: Error in saving diffmeth data
... Have you found the issue / solved the problem? We are running into the same problem. ...
written 5 weeks ago by P Darakjian40
0
votes
1
answer
424
views
1
answers
Comment: C: Normalize data across platforms
... Maybe this will help you regarding control probes across platforms --> https://aberdeen.ac.uk/ims/facilities/microarray/documents/chipcontrol s.doc Regards Priscila -----Original Message----- From: bioconductor-bounces@stat.math.ethz.ch [mailto:bioconductor- bounces@stat.math.ethz.ch] On Behal ...
written 10.6 years ago by P Darakjian40
0
votes
2
answers
674
views
2
answers
Comment: C: Newbie Illumina Probe Annotation (beadarray) Problem
... I haven't used the illuminaMousev1p1.db. However, and maybe this might help you to go in the right direction, the Illumina annotation files have a column named "Probe_ID." This id is supposed to identify the specific probe sequence across arrays (if you compare across arrays you will see that, for a ...
written 10.7 years ago by P Darakjian40
0
votes
2
answers
674
views
2
answers
Comment: C: Newbie Illumina Probe Annotation (beadarray) Problem
... Actually, I would look at MouseRef-8_V1_1_R3_11234312_A.bgx (this probably has some annotation changes that were not present in R1) -----Original Message----- From: bioconductor-bounces@stat.math.ethz.ch [mailto:bioconductor- bounces@stat.math.ethz.ch] On Behalf Of Priscila Darakjian Sent: Thursday ...
written 10.7 years ago by P Darakjian40
0
votes
2
answers
674
views
2
answers
Answer: A: Newbie Illumina Probe Annotation (beadarray) Problem
... Look at http://www.switchtoi.com/annotationprevfiles.ilmn I believe you will be interested specifically in either of these two files: MouseRef-8_V1_1_R3_11234312_A.bgx (this is revision 3) MouseRef-8_V1_1_R1_11234312_A.bgx Good luck, Priscila -----Original Message----- From: bioconductor-bounces ...
written 10.7 years ago by P Darakjian40

Latest awards to P Darakjian

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 397 users visited in the last hour