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Comment: C: Convert MethyLumiSet into RGChannelSet (Illumina EPIC methylation data)
4.0 years ago Tim Triche ★ 4.2k
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2.1k
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Comment: C: ChAMP Normalization on EPIC Methylation Data
5.5 years ago Tim Triche ★ 4.2k
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2.2k
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Comment: C: ExperimentHub wackiness (which breaks packages that depend upon experimentHub-pr
5.7 years ago Tim Triche ★ 4.2k
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4.4k
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Comment: C: Illumina MethylationEPIC vs. 450K
7.6 years ago Tim Triche ★ 4.2k
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3.9k
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Comment: C: Removing sex-chromosome probes from methyLumiSet
updated 8.8 years ago by ★ 8.2k • written 8.8 years ago by ★ 4.2k
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3.9k
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Comment: C: Removing sex-chromosome probes from methyLumiSet
8.8 years ago Tim Triche ★ 4.2k
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3.9k
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Comment: C: Removing sex-chromosome probes from methyLumiSet
8.8 years ago Tim Triche ★ 4.2k
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0
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3.1k
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Comment: C: Annotation DB for ArrayStar lncRNA arrays
9.1 years ago Tim Triche ★ 4.2k
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1
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2.5k
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Comment: C: frma vectors for GPL13158 (Affymetrix HT HG-U133+ PM Array Plate)?
9.2 years ago Tim Triche ★ 4.2k
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1.2k
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Comment: C: How many arrays are "enough" for creating useful fRMA vectors?
9.4 years ago Tim Triche ★ 4.2k
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2.4k
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Comment: C: Adding annotations to GSE datasets
9.9 years ago Tim Triche ★ 4.2k
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1
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2.1k
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Comment: C: granges() method for GenomicRanges objects akin to ranges()...
10.0 years ago Tim Triche ★ 4.2k
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2.1k
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Comment: C: granges() method for GenomicRanges objects akin to ranges()...
10.0 years ago Tim Triche ★ 4.2k
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1
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2.1k
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Comment: C: granges() method for GenomicRanges objects akin to ranges()...
10.0 years ago Tim Triche ★ 4.2k
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952
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Comment: C: Looking for a function
10.0 years ago Tim Triche ★ 4.2k
0
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1
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3.4k
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Comment: C: doParallel with Bumphunter gives Error in mcfork()
10.0 years ago Tim Triche ★ 4.2k
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1
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2.9k
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Comment: C: bumphunter DMRs difficulties
10.2 years ago Tim Triche ★ 4.2k
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1
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4.5k
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Comment: C: limma-voom
10.2 years ago Tim Triche ★ 4.2k
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3.9k
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Comment: C: Q-values way smaller than P-values! Is that kosher?
10.3 years ago Tim Triche ★ 4.2k
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1
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3.9k
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Comment: C: Q-values way smaller than P-values! Is that kosher?
10.3 years ago Tim Triche ★ 4.2k
0
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1
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2.4k
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Comment: C: Limma, blocking, robust methods, and paired samples question
10.4 years ago Tim Triche ★ 4.2k
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5.6k
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Comment: C: Illumina Expression analysis from iDAT files
10.4 years ago Tim Triche ★ 4.2k
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1
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2.3k
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Comment: C: GRanges Overlaps
10.4 years ago Tim Triche ★ 4.2k
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3.8k
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Comment: C: Gene filtering for RNA-seq data
10.4 years ago Tim Triche ★ 4.2k
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1.7k
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Comment: C: SCAN.UPC for Illumina arrays?
10.4 years ago Tim Triche ★ 4.2k
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1.7k
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Comment: C: SCAN.UPC for Illumina arrays?
10.4 years ago Tim Triche ★ 4.2k
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2
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2.2k
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Comment: C: MethyLumiM to MethyLumiSet?
10.5 years ago Tim Triche ★ 4.2k
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1
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2.5k
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Comment: C: Genome Browser and R
10.5 years ago Tim Triche ★ 4.2k
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1
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2.5k
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Comment: C: Genome Browser and R
10.5 years ago Tim Triche ★ 4.2k
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1
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2.5k
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Comment: C: Genome Browser and R
10.5 years ago Tim Triche ★ 4.2k
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2
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2.5k
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Comment: C: Genome Browser and R
10.5 years ago Tim Triche ★ 4.2k
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1
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2.0k
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Comment: C: Lumi failed to load
10.5 years ago Tim Triche ★ 4.2k
0
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1
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1.7k
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Comment: C: plot methylation figure for end analysis
10.6 years ago Tim Triche ★ 4.2k
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1
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1.3k
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Comment: C: minfi: control probes sequence
10.6 years ago Tim Triche ★ 4.2k
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2
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1.3k
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Comment: C: minfi: control probes sequence
10.6 years ago Tim Triche ★ 4.2k
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1
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6.4k
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Comment: C: RSEM for transcript and gene level read count and edgeR differential expression
10.7 years ago Tim Triche ★ 4.2k
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1
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6.4k
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Comment: C: RSEM for transcript and gene level read count and edgeR differential expression
10.7 years ago Tim Triche ★ 4.2k
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1
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1.5k
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Comment: C: combining/merging several ExpressionSet objects from SCAN
10.7 years ago Tim Triche ★ 4.2k
0
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1
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1.5k
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Comment: C: combining/merging several ExpressionSet objects from SCAN
10.7 years ago Tim Triche ★ 4.2k
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1.5k
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Comment: C: combining/merging several ExpressionSet objects from SCAN
10.7 years ago Tim Triche ★ 4.2k
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1
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1.5k
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Comment: C: combining/merging several ExpressionSet objects from SCAN
10.7 years ago Tim Triche ★ 4.2k
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0
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1.7k
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Comment: C: Filtering BAM files by start position for VariantTools
10.7 years ago Tim Triche ★ 4.2k
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1
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2.1k
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Comment: C: GSE states
10.7 years ago Tim Triche ★ 4.2k
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2.1k
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Comment: C: GSE states
10.7 years ago Tim Triche ★ 4.2k
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1
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2.1k
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Comment: C: GSE states
10.7 years ago Tim Triche ★ 4.2k
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1
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1.3k
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Comment: C: Excluding probes during methylation analysis
10.8 years ago Tim Triche ★ 4.2k
0
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0
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3.1k
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Comment: C: Use which method to calculate q-value or adjusted p-value
10.8 years ago Tim Triche ★ 4.2k
0
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0
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2.4k
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Comment: C: IlluminaHumanMethylation450k.db: Missing probes in IlluminaHumanMethylation450kP
10.8 years ago Tim Triche ★ 4.2k
0
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1
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2.4k
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Comment: C: IlluminaHumanMethylation450k.db: Missing probes in IlluminaHumanMethylation450kP
10.8 years ago Tim Triche ★ 4.2k
0
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1
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2.4k
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Comment: C: IlluminaHumanMethylation450k.db: Missing probes in IlluminaHumanMethylation450kP
10.8 years ago Tim Triche ★ 4.2k
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