User: John Stevens

gravatar for John Stevens
John Stevens30
Reputation:
30
Status:
New User
Location:
Last seen:
6 years, 3 months ago
Joined:
8 years, 1 month ago
Email:
j*************@usu.edu

Posts by John Stevens

<prev • 3 results • page 1 of 1 • next >
0
votes
2
answers
492
views
2
answers
Answer: A: Missing values - metaArray, GeneMeta, RankProd, metahdep
... Hi Maciej, My metahdep package doesn't require all datasets to come from the same array version -- so while the package's tutorial vignette doesn't explicitly say anything about missing values, the example there does allow for missing values in this sense (some genes not represented in all datasets ...
written 6.3 years ago by John Stevens30
0
votes
1
answers
315
views
1
answers
Answer: A: intersection between genes and pathways
... Hi Alberto, There may be a more elegant way to do this, but I think you'll want to make use of the rat2302PATH2PROBE object in the rat2302.db package. The key is that you first need the path ID, and that's available through the KEGG.db package. Below is some starter code; I hope it helps. Regards ...
written 7.7 years ago by John Stevens30
0
votes
1
answers
384
views
1
answers
Answer: A: predict an ordinal response variable from high-throughput gene expression data
... Shirley, The globaltest package can handle binary, multinomial (nominal), and continuous response with very large numbers of predictors. I'm not sure it does ordinal response (with proportional odds), though. John Stevens Utah State University -----Original Message----- From: bioconductor-bounc ...
written 8.1 years ago by John Stevens30

Latest awards to John Stevens

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 193 users visited in the last hour