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OFF TOPIC How measures is more appropriated to statistical analysis?
17.5 years ago Marcelo Luiz de Laia ▴ 770
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8
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1.4k
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[SAGEnhaft] This library does all post analysis on SAGE or is need another software for to do?
SAGE sagenhaft SAGE sagenhaft
updated 17.6 years ago by ▴ 220 • written 17.6 years ago by ▴ 770
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887
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design matrix question
limma limma
18.2 years ago Marcelo Luiz de Laia ▴ 770
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0
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1.1k
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limma design: a basics questions for factorial analysis
GO limma GO limma
18.2 years ago Marcelo Luiz de Laia ▴ 770
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1
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901
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Help to analyse a complex experiment
Genetics Normalization vsn limma Genetics Normalization vsn limma
updated 18.3 years ago by ★ 6.0k • written 18.3 years ago by ▴ 770
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3
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1.4k
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[TimeCourse Package] Warnings message
Genetics TimeCourse timecourse Genetics TimeCourse timecourse
updated 18.3 years ago by ▴ 440 • written 18.3 years ago by ▴ 770
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1
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1.2k
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Problem with ljava when I run update.packages2
Genetics RMAGEML Genetics RMAGEML
updated 18.3 years ago by 25k • written 18.3 years ago by ▴ 770
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3
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782
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[Limma] M value in contrast test
limma limma
updated 18.5 years ago by 65k • written 18.5 years ago by ▴ 770
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1
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735
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[OT] Help to creating a function to automate the plotProfile function in timecourse
TimeCourse timecourse TimeCourse timecourse
updated 18.5 years ago by ▴ 320 • written 18.5 years ago by ▴ 770
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1
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2.9k
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Cannot find xml2-config
updated 18.5 years ago by ★ 7.4k • written 18.5 years ago by ▴ 770
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494
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[OFF TOPIC] Script/Software to prediction of bacterium promoter element
18.6 years ago Marcelo Luiz de Laia ▴ 770
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0
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830
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heatmap and hcluster from limma out put object
Pathways limma Pathways limma
18.7 years ago Marcelo Luiz de Laia ▴ 770
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0
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814
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M value in topTable and Fold Change
GO limma GO limma
18.9 years ago Marcelo Luiz de Laia ▴ 770
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1
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1.1k
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Error installing genefilter
annotate genefilter affy vsn annotate genefilter affy vsn
updated 19.0 years ago by ★ 13k • written 19.0 years ago by ▴ 770
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3
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967
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quality data check
affy vsn limma affy vsn limma
updated 19.0 years ago by 21k • written 19.0 years ago by ▴ 770
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0
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808
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How extract F.p.value and lods values from a eBayes object in limma???
19.0 years ago Marcelo Luiz de Laia ▴ 770
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1
reply
774
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lmFit: how method I use in non-Affy single channel
limma limma
updated 19.1 years ago by 50k • written 19.1 years ago by ▴ 770
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12
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1.7k
views
loged data or not loged previous to use normalize.quantile
limma limma
updated 19.1 years ago by ▴ 90 • written 19.1 years ago by ▴ 770
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698
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affy to normalize others single chanels...
affy limma affy limma
19.2 years ago Marcelo Luiz de Laia ▴ 770
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2
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1.0k
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normalizeQuantiles : log2 or not??
Normalization vsn Normalization vsn
19.2 years ago Marcelo Luiz de Laia ▴ 770
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0
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587
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[limma] How do I do to obtain DE genes in Time CourseExperiments?
Annotation limma Annotation limma
19.2 years ago Marcelo Luiz de Laia ▴ 770
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0
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706
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[limma] How do I do to obtain DE genes in Time Course Experiments?
limma limma
19.2 years ago Marcelo Luiz de Laia ▴ 770
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2
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735
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set geneNames in exprSet object
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ▴ 770
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0
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805
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exprSet object help
Biobase affy Biobase affy
19.2 years ago Marcelo Luiz de Laia ▴ 770
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0
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786
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Statistical design help before proceed with biological experiments
19.3 years ago Marcelo Luiz de Laia ▴ 770
0
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3
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719
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affy to normalize others single chanels...
affy affy
updated 19.3 years ago by ★ 2.3k • written 19.3 years ago by ▴ 770
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0
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519
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[limma] Interpreting B and P values
19.8 years ago Marcelo Luiz de Laia ▴ 770
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0
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566
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Doubt to set layout in limma
20.0 years ago Marcelo Luiz de Laia ▴ 770
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0
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499
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Help in analysis
limma limma
20.1 years ago Marcelo Luiz de Laia ▴ 770
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3
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922
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suggestions of books
updated 20.1 years ago by ▴ 100 • written 20.1 years ago by ▴ 770
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0
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820
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[limma] heatDiagram function doubts
20.2 years ago Marcelo Luiz de Laia ▴ 770
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1
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757
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Contrast, help
updated 20.2 years ago by 21k • written 20.2 years ago by ▴ 770
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0
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855
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Help for analysis a Factorial experiment
20.3 years ago Marcelo Luiz de Laia ▴ 770
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4
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1.0k
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[maNorm] Normalization a complex experiment...
Normalization limma marray Normalization limma marray
updated 20.3 years ago by 50k • written 20.3 years ago by ▴ 770
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0
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858
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make a dendrogram, cluster
20.4 years ago Marcelo Luiz de Laia ▴ 770
0
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2
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811
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Help for make a dendrogram (philogenetic tree)
limma marray limma marray
updated 20.4 years ago by 50k • written 20.4 years ago by ▴ 770
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0
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586
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Help for make a dendrogram (philogenetic tree)
limma marray limma marray
20.4 years ago Marcelo Luiz de Laia ▴ 770
0
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1
reply
781
views
A question about multiple analysis
updated 20.5 years ago by 50k • written 20.5 years ago by ▴ 770
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1
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700
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limma design matrix question
updated 20.5 years ago by 50k • written 20.5 years ago by ▴ 770
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2
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850
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[marrayNorm] Is it possible to obtain normalized intensity values ?
updated 20.5 years ago by ▴ 920 • written 20.5 years ago by ▴ 770
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3
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864
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[limma] How do I set "spacing" in lmFit ???
updated 20.5 years ago by 50k • written 20.5 years ago by ▴ 770
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1
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661
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Doubt and Problem(?) with analysis with marray tools
Normalization limma Normalization limma
updated 20.5 years ago by 50k • written 20.5 years ago by ▴ 770
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2
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686
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How package I use for verify differentialy expressed genes after Normalization with marrayNorm?
updated 20.5 years ago by ▴ 920 • written 20.5 years ago by ▴ 770
0
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1
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912
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question in read.exprSet and read.phenoData
20.5 years ago Marcelo Luiz de Laia ▴ 770
0
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2
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835
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Creating an new exprSet
vsn vsn
updated 20.5 years ago by ★ 2.3k • written 20.5 years ago by ▴ 770
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4
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1.3k
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Error in load VSN library
vsn vsn
updated 20.5 years ago by 65k • written 20.5 years ago by ▴ 770
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1
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466
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Interpreting results...
updated 20.5 years ago by ▴ 1000 • written 20.5 years ago by ▴ 770
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2
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684
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Remove some genes from analysis in limma package? Is it possible?
updated 20.5 years ago by ▴ 1000 • written 20.5 years ago by ▴ 770
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1
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739
views
Begginig doubts about layout and toptable
limma limma
updated 20.5 years ago by ▴ 70 • written 20.5 years ago by ▴ 770
0
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7
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1.2k
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Error with ImaGene out put file in limma
limma limma
updated 20.5 years ago by ▴ 70 • written 20.5 years ago by ▴ 770
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