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674
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Types of overlap Iranges
IRanges IRanges
9.8 years ago Michael Lawrence ★ 11k
0
votes
4
replies
1.4k
views
GenomicRanges select parameter
GenomicRanges ASSIGN GenomicRanges ASSIGN
updated 9.9 years ago by ▴ 30 • written 9.9 years ago by ★ 11k
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0
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857
views
GenomicFeatures::makeTranscriptDbFromUCSC broken?
GenomicFeatures GenomicFeatures
9.9 years ago Michael Lawrence ★ 11k
1
vote
3
replies
2.2k
views
views on Rle using GRanges object
RNASeq Coverage GO Cancer bridge rtracklayer IRanges RNASeq Coverage GO Cancer bridge
updated 10.1 years ago by 16k • written 10.1 years ago by ★ 11k
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votes
2
replies
1.0k
views
Most efficient way to compute width of overlap of multiple features
10.1 years ago Michael Lawrence ★ 11k
0
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0
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824
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rtracklayer connect problems
rtracklayer rtracklayer
10.1 years ago Michael Lawrence ★ 11k
0
votes
0
replies
913
views
Bioconductor GSoC projects: DEADLINE TODAY
mzR mzR
10.1 years ago Michael Lawrence ★ 11k
0
votes
0
replies
369
views
removing some mcols from tallyVariants output
10.2 years ago Michael Lawrence ★ 11k
0
votes
3
replies
962
views
Bioconductor refLocs2TranscriptLocs function
VariantAnnotation convert GenomicRanges VariantAnnotation VariantAnnotation convert
10.6 years ago Michael Lawrence ★ 11k
0
votes
0
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838
views
Bioconductor refLocs2TranscriptLocs function
VariantAnnotation convert GenomicRanges VariantAnnotation VariantAnnotation convert
10.6 years ago Michael Lawrence ★ 11k
0
votes
5
replies
1.7k
views
rsbml package installation error
graph rsbml graph rsbml
updated 10.6 years ago by ▴ 50 • written 10.6 years ago by ★ 11k
0
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0
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1.2k
views
Reopening of Computational Biologist position at Genentech
Infrastructure PROcess Infrastructure PROcess
10.7 years ago Michael Lawrence ★ 11k
0
votes
2
replies
1.0k
views
*Ranges paper published
Infrastructure IRanges GenomicFeatures GenomicRanges Infrastructure IRanges GenomicFeatures
updated 10.7 years ago by ★ 4.2k • written 10.7 years ago by ★ 11k
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0
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1.1k
views
Error converting SBML to graph Object using R SBML
Network graph convert rsbml Network graph convert rsbml
10.7 years ago Michael Lawrence ★ 11k
0
votes
4
replies
1.8k
views
Rsamtools: Realloc integer overflow?
Coverage Coverage
updated 10.9 years ago by 25k • written 10.9 years ago by ★ 11k
0
votes
1
reply
591
views
summarizeOverlaps: ambiguous method dispatch
GO GO
updated 10.9 years ago by 25k • written 10.9 years ago by ★ 11k
0
votes
6
replies
1.5k
views
Creating an OrganismDbi package with a few transcript annotations
OrgDb OrganismDbi OrgDb OrganismDbi
updated 10.9 years ago by 25k • written 10.9 years ago by ★ 11k
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votes
0
replies
956
views
Genentech Bioinformatics is seeking R programming contractors
Sequencing Sequencing
10.9 years ago Michael Lawrence ★ 11k
0
votes
2
replies
1.4k
views
IdeogramTrack and bigWig file errors in Gviz
Network rtracklayer CAMERA Gviz Network rtracklayer CAMERA Gviz
11.0 years ago Michael Lawrence ★ 11k
0
votes
1
reply
798
views
expand() vcf with no info columns
updated 11.1 years ago by ★ 6.8k • written 11.1 years ago by ★ 11k
0
votes
2
replies
2.8k
views
GRanges() and naming of metadata columns has changed
updated 11.1 years ago by 16k • written 11.1 years ago by ★ 11k
0
votes
4
replies
758
views
biocLite and unknown svn revision
PROcess PROcess
updated 11.1 years ago by 25k • written 11.1 years ago by ★ 11k
0
votes
5
replies
1.6k
views
Visualization of alignments with mismatch bases
SNP Coverage Alignment Visualization ggbio SNP Coverage Alignment Visualization ggbio
updated 11.2 years ago by ▴ 420 • written 11.2 years ago by ★ 11k
0
votes
1
reply
719
views
SNPlocs -> VCF or similar
convert convert
updated 11.2 years ago by 16k • written 11.2 years ago by ★ 11k
0
votes
2
replies
626
views
problem RangedData
11.3 years ago Michael Lawrence ★ 11k
0
votes
0
replies
1.3k
views
Open computational biologist position at Genentech
Infrastructure Infrastructure
11.3 years ago Michael Lawrence ★ 11k
0
votes
0
replies
519
views
reducing hits from countGenomicOverlaps()
Cancer Cancer
11.3 years ago Michael Lawrence ★ 11k
0
votes
5
replies
1.1k
views
pooling for parallel hierarchical operations
Infrastructure Infrastructure
updated 11.4 years ago by 25k • written 11.4 years ago by ★ 11k
0
votes
0
replies
641
views
GappedAlignmentPairs requests
11.8 years ago Michael Lawrence ★ 11k
0
votes
0
replies
969
views
rsbml: problem writing a model to file
rsbml rsbml
12.0 years ago Michael Lawrence ★ 11k
0
votes
0
replies
542
views
Fwd: findOverlaps with strand info
12.2 years ago Michael Lawrence ★ 11k
0
votes
2
replies
962
views
"internal equal" overlap mode for GRangesList
Infrastructure Infrastructure
updated 12.5 years ago by ★ 1.6k • written 12.5 years ago by ★ 11k
0
votes
6
replies
577
views
biocLite breaks when `svn rev` is "unknown"
updated 12.5 years ago by 25k • written 12.5 years ago by ★ 11k
0
votes
0
replies
899
views
rtracklayer::liftOver ordering
12.6 years ago Michael Lawrence ★ 11k
0
votes
1
reply
1.3k
views
rtracklayer Rle to bigWig (export.bw ?)
12.8 years ago Michael Lawrence ★ 11k
0
votes
0
replies
966
views
rtracklayer
Coverage Cancer Coverage Cancer
13.0 years ago Michael Lawrence ★ 11k
0
votes
0
replies
551
views
rtracklayer - getTable
Cancer rtracklayer Cancer rtracklayer
14.0 years ago Michael Lawrence ★ 11k
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