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Comment: C: dealing with BATCH effect/ donor variation in RNA seq data
3.7 years ago Simon Anders ★ 3.7k
0
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1
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862
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Answer: A: DEXSeq : can we plot from the table of results or/and run DEXSeq from a matrix o
3.7 years ago Simon Anders ★ 3.7k
2
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1
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845
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Answer: A: Mocking data for understanding interactions in DESeq2
4.0 years ago Simon Anders ★ 3.7k
0
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1
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1.3k
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Answer: A: Wrong results of DESeq compared to DESeq2 for some test cases?
4.1 years ago Simon Anders ★ 3.7k
0
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0
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1.3k
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Comment: C: Wrong results of DESeq compared to DESeq2 for some test cases?
4.1 years ago Simon Anders ★ 3.7k
0
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0
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1.1k
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Comment: C: how to analyze and find differentially expressed genes based on miRNA gene raw
4.2 years ago Simon Anders ★ 3.7k
0
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1
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1.1k
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Answer: C: how to analyze and find differentially expressed genes based on miRNA gene raw
4.2 years ago Simon Anders ★ 3.7k
4
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1
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4.4k
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Answer: A: TMM Normalization: DESeqDataSet: some values in assay are negative
4.7 years ago Simon Anders ★ 3.7k
0
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0
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1.7k
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Comment: C: Paired samples in cell lines using DESeq2
4.8 years ago Simon Anders ★ 3.7k
0
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1
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894
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Answer: A: DEXSeq error in dexseq_count.py. ValueError: need more than 4 values to unpack
4.8 years ago Simon Anders ★ 3.7k
0
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2
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963
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Comment: C: Genes that have NOT changed
5.3 years ago Simon Anders ★ 3.7k
1
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0
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906
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Job: applied methods development for single-cell sequencing
single-cell job computational biology Job
5.4 years ago Simon Anders ★ 3.7k
0
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0
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843
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Comment: C: p-values smaller than machine epsilon in DESeq2
5.5 years ago Simon Anders ★ 3.7k
0
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1
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2.7k
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Comment: C: DESeq2 Time Series and "control" condition
updated 5.5 years ago by 41k • written 5.5 years ago by ★ 3.7k
0
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0
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1.0k
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Job: PhD opportunity in Heidelberg for computational people
PhD position job single-cell Job
5.5 years ago Simon Anders ★ 3.7k
4
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0
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14k
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Answer: A: latest version of R is 3.5.1 and it does not compatible with many Bioconductor p
5.7 years ago Simon Anders ★ 3.7k
0
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1
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2.1k
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Comment: C: DESeq2 Multi factor, multi time point comparison design formula
5.7 years ago Simon Anders ★ 3.7k
0
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0
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1.3k
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Answer: A: RNA-seq data analysis with two species using DESeq2
5.7 years ago Simon Anders ★ 3.7k
0
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1
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1.3k
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Comment: C: RNA-seq data analysis with two species using DESeq2
5.7 years ago Simon Anders ★ 3.7k
0
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1
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601
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Answer: A: should I get the logarithm of count values when I use standard method
5.9 years ago Simon Anders ★ 3.7k
1
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0
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1.3k
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Answer: A: ASE using DESeq2
5.9 years ago Simon Anders ★ 3.7k
0
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0
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13k
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Comment: C: Normalization by DEseq
6.1 years ago Simon Anders ★ 3.7k
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0
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4.6k
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Comment: C: Comparing between two differential expression analysis - two different fold chan
6.1 years ago Simon Anders ★ 3.7k
0
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0
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936
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Comment: C: Requesting help with RNA-Seq differential gene analysis
6.2 years ago Simon Anders ★ 3.7k
0
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0
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4.6k
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Comment: C: Comparing between two differential expression analysis - two different fold chan
6.2 years ago Simon Anders ★ 3.7k
0
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2
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4.6k
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Answer: A: Comparing between two differential expression analysis - two different fold chan
6.2 years ago Simon Anders ★ 3.7k
1
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0
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795
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Comment: C: Errors of loading HilbertVisGUI
6.2 years ago Simon Anders ★ 3.7k
1
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1
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3.3k
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Comment: C: DESeq2 results export padj sorted
6.3 years ago Simon Anders ★ 3.7k
0
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1
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3.3k
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Comment: C: DESeq2 results export padj sorted
6.3 years ago Simon Anders ★ 3.7k
0
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1
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3.3k
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Comment: C: DESeq2 results export padj sorted
6.3 years ago Simon Anders ★ 3.7k
1
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0
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1.8k
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Comment: C: Matrix not full rank - DESeq2
6.3 years ago Simon Anders ★ 3.7k
1
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1
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1.8k
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Answer: A: Matrix not full rank - DESeq2
6.3 years ago Simon Anders ★ 3.7k
1
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1
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2.8k
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Answer: A: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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0
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2.8k
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Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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1
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2.8k
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Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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1
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2.8k
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Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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0
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2.8k
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Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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1
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2.8k
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Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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2
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2.8k
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Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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1
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1.9k
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Comment: C: Standardizing gene symbols
6.4 years ago Simon Anders ★ 3.7k
0
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0
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21k
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Answer: A: Determining gene expression levels with DESeq2 in a design with no condition
6.4 years ago Simon Anders ★ 3.7k
0
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1
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723
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Comment: C: deseq2 low read input
6.5 years ago Simon Anders ★ 3.7k
0
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1
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4.6k
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Comment: C: DESeq2 unequal sample sizes
6.5 years ago Simon Anders ★ 3.7k
0
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1
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2.4k
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Comment: C: Sample label swap in HTML results
6.8 years ago Simon Anders ★ 3.7k
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2
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2.4k
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Comment: C: Sample label swap in HTML results
6.8 years ago Simon Anders ★ 3.7k
0
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1
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5.7k
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Comment: C: P values from Deseq Analysis
6.9 years ago Simon Anders ★ 3.7k
0
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0
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5.7k
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Comment: C: P values from Deseq Analysis
6.9 years ago Simon Anders ★ 3.7k
4
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0
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5.7k
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Answer: A: P values from Deseq Analysis
6.9 years ago Simon Anders ★ 3.7k
2
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0
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1.4k
views
Job: PhD Position for computational scientist in Heidelberg
computational biology job bioinformatician job Job
7.0 years ago Simon Anders ★ 3.7k
3
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1
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2.1k
views
Comment: C: DESeq2: interaction term as in limma
7.0 years ago Simon Anders ★ 3.7k
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