Admin: Valerie Obenchain

gravatar for Valerie Obenchain
Valerie Obenchain ♦♦ 6.4k
Reputation:
6,440
Status:
Trusted
Location:
United States
Last seen:
5 days, 21 hours ago
Joined:
7 years, 7 months ago
Email:
v****************@roswellpark.org

Posts by Valerie Obenchain

<prev • 804 results • page 2 of 81 • next >
0
votes
2
answers
285
views
2
answers
Comment: C: GRanges::distanceToNearest does not return distance to nearest
... Thanks for reporting this bug. We'll post back when it's fixed. Valerie ...
written 4 months ago by Valerie Obenchain ♦♦ 6.4k
0
votes
1
answers
154
views
1
answers
Answer: A: Issues installing "CardinalWorkflows"
... Looks like a problem with the space in 'Program Files' in the path. You need quotes around this - either when defined as a variable or invoked. If that doesn't work, try using a library path (see ?.libPaths() or ?R_LIBS_USER) that does not contain spaces or special characters. Valerie ...
written 4 months ago by Valerie Obenchain ♦♦ 6.4k
0
votes
1
answers
174
views
1
answers
Comment: C: 403 Forbidden During Install
... Thanks for sending the IP and yes, it was blacked for the reasons you describe. It's been removed from the blacklist and you should have access now. Thanks for fixing the cluster configuration. Valerie ...
written 5 months ago by Valerie Obenchain ♦♦ 6.4k
0
votes
1
answers
174
views
1
answers
Answer: A: 403 Forbidden During Install
... What is the IP of the cluster being blocked? Valerie ...
written 5 months ago by Valerie Obenchain ♦♦ 6.4k
3
votes
0
answers
1.8k
views
0
answers
News: Bioconductor Package Archives
... BioC community, Starting with BioC 3.6 we are providing an Archive directory for each release. The Archive contains all package versions that occur during the 6 month cycle. This will be done for the release branch only. The structure is similar to the CRAN Archives except there will be a separate ...
news bioconductor archive written 5 months ago by Valerie Obenchain ♦♦ 6.4k
5
votes
0
answers
213
views
0
answers
News: Bioconductor 3.6 is released
... Thanks to all the developers for your contribution to the project! Full release announcement here:   http://bioconductor.org/news/bioc_3_6_release/ ...
news bioconductor release written 5 months ago by Valerie Obenchain ♦♦ 6.4k
0
votes
0
answers
184
views
0
answers
News: Bioconductor 3.6 release: 3.6 branch created
... The BioC 3.6 branch is now ready. Remember, you always have access to 2 versions of your package in git: the "release" and "devel" versions. The “release” branch is for bug fixes and documentation improvements only. The “devel” branch is where normal development should occur.  To continue using yo ...
news bioconductor release written 5 months ago by Valerie Obenchain ♦♦ 6.4k
0
votes
0
answers
304
views
0
answers
News: Bioconductor 3.6 release: stop commits to git.bioconductor.org
... Hello BioC developers, We will be creating the Bioconductor 3.6 branch today in about 30 minutes, around 11:30 am EST. Please stop all pushes/commits to git.bioconductor.org before 11:30 am EST (3:30 UTC) and do not resume until further notice. We will send another email when it is OK to resume c ...
news bioconductor release written 5 months ago by Valerie Obenchain ♦♦ 6.4k
0
votes
0
answers
192
views
0
answers
News: Bioconductor 3.6 release
... The release of Bioconductor 3.6 will be Tuesday, October 31. Please see the schedule for details:   http://www.bioconductor.org/developers/release-schedule/ Over the next month we'll announce key deadlines on the bioc-devel mailing list:   https://stat.ethz.ch/pipermail/bioc-devel/ Part of pre ...
news bioconductor release written 7 months ago by Valerie Obenchain ♦♦ 6.4k
0
votes
1
answers
226
views
1
answers
Comment: C: Error in columns(org.Hs.eg.db) : could not find function "columns"
... Please edit your question to show the error and the output of your sessionInfo(). ...
written 7 months ago by Valerie Obenchain ♦♦ 6.4k

Latest awards to Valerie Obenchain

Scholar 10 months ago, created an answer that has been accepted. For A: about collapsed and expanded vcf file
Scholar 10 months ago, created an answer that has been accepted. For A: about collapsed and expanded vcf file
Appreciated 12 months ago, created a post with more than 5 votes. For Bioconductor 3.5 is released
Scholar 12 months ago, created an answer that has been accepted. For A: about collapsed and expanded vcf file
Teacher 12 months ago, created an answer with at least 3 up-votes. For A: about collapsed and expanded vcf file
Teacher 13 months ago, created an answer with at least 3 up-votes. For A: about collapsed and expanded vcf file
Popular Question 13 months ago, created a question with more than 1,000 views. For merging VCF files
Scholar 15 months ago, created an answer that has been accepted. For A: about collapsed and expanded vcf file
Teacher 15 months ago, created an answer with at least 3 up-votes. For A: about collapsed and expanded vcf file
Scholar 24 months ago, created an answer that has been accepted. For A: distinguish DataSource from Provider and ProviderVersion in makeTxDbPackage
Scholar 24 months ago, created an answer that has been accepted. For A: BiocParallel example does not work any more (sbatch produced exit code 1)
Scholar 24 months ago, created an answer that has been accepted. For A: Genomic features for genomic positions
Scholar 24 months ago, created an answer that has been accepted. For A: AnnotationHub: A RPKM data.frame of Epigenomics RoadMap Project seems strange
Scholar 24 months ago, created an answer that has been accepted. For A: Broken AnnotationHub resource (AH25517 | wgEncodeOpenChromDnaseGm12878Pk.narrowP
Appreciated 24 months ago, created a post with more than 5 votes. For New Package Submission Process
Scholar 24 months ago, created an answer that has been accepted. For A: AnnotationHub: two broad peaks from same url are not the same
Scholar 24 months ago, created an answer that has been accepted. For A: inconsistent default of file suffix
Scholar 24 months ago, created an answer that has been accepted. For A: GAGE pathway analysis (R/Bioconductor): summarizeOverlaps error
Teacher 24 months ago, created an answer with at least 3 up-votes. For A: Genomic features for genomic positions
Teacher 24 months ago, created an answer with at least 3 up-votes. For A: readGAlignmentPairs slow in problematic region
Teacher 24 months ago, created an answer with at least 3 up-votes. For A: AnnotationHub: two broad peaks from same url are not the same
Teacher 24 months ago, created an answer with at least 3 up-votes. For A: GenomicAlignments is too slow with summarizeOverlaps
Scholar 24 months ago, created an answer that has been accepted. For A: GenomicAlignments is too slow with summarizeOverlaps
Scholar 24 months ago, created an answer that has been accepted. For A: Intersecting a Granges and a GRangesList using within
Scholar 2.1 years ago, created an answer that has been accepted. For A: inconsistent default of file suffix

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 158 users visited in the last hour