User: Radhouane Aniba

gravatar for Radhouane Aniba
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Posts by Radhouane Aniba

<prev • 26 results • page 2 of 3 • next >
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Comment: C: Gene Lists and Genomes
... 2011/5/5 Steve Lianoglou > Hi, > > On Thu, May 5, 2011 at 12:25 PM, Radhouane Aniba > wrote: > > Thanks Tim, > > > > Actually I have a predicted list of miRNA binding sites targetting > specific > > genes in 4 genomes. > > > > What I am trying to ...
written 8.6 years ago by Radhouane Aniba240
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Comment: C: Gene Lists and Genomes
... Thanks Tim, Actually I have a predicted list of miRNA binding sites targetting specific genes in 4 genomes. What I am trying to find is the characteristics of these Genes {g} for a specific genome {G} in term of GO enrichement and KEGG enrichment. My starting point is a file with a list of ENSEMB ...
written 8.6 years ago by Radhouane Aniba240
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Gene Lists and Genomes
... Hello everyone, Well I am aware of some packages in Bioconductor that are useful for measuring the GO or KEGG gene enrichment in a given file for a given genome, GOstats, GSEA etc .. My question is : I am working with 4 differents genomes, I have gene lists for each of them, and I want for a given ...
go genomes written 8.6 years ago by Radhouane Aniba240 • updated 8.6 years ago by Tim Triche4.2k
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GO enrichment and pathways
... Hi everyone, I am looking for a bioconductor packages that take a gene list and output the enrichement in term of GO (which processes ? wchich functions ?) and eventually kegg pathways with pvalues that describes the enrichement Any idea ? or help ? Regards Radhouane -- *Radhouane Aniba* *Bioin ...
pathways go written 8.7 years ago by Radhouane Aniba240 • updated 8.7 years ago by Yuan Hao240
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Idea that needs feedback
... Hello everyone, Thank you again for your useful comments and ideas. Finally the website is up and running, would you please join me there and send me your comments and suggestions. Please feel free to ask any question you have. The website URL is http://biocoders.net Thank you again and hope you ...
written 8.9 years ago by Radhouane Aniba240
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Comment: C: Procedure
... Yes Sean, I meant public data. Thank you for your answer. Radhouane 2011/1/7 Sean Davis > > > On Fri, Jan 7, 2011 at 3:12 PM, Radhouane Aniba wrote: > >> Hi BioC, >> >> A lot of yeast cross species expression data analysis exist in litterature >> today, is i ...
written 8.9 years ago by Radhouane Aniba240
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Procedure
... Hi BioC, A lot of yeast cross species expression data analysis exist in litterature today, is it a common procedure to process litterature for newly expressed species, let's stay in fungi for example. Is it possible to do an automated scan through databases using Bioconductor ? if yes which packag ...
yeast process written 8.9 years ago by Radhouane Aniba240 • updated 8.9 years ago by Sean Davis21k
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Answer: A: Idea that needs feedback
... Hello Rick, Thank you for your email. I totally agree with you. Could you please fill in this form in order to announce the website. Here is the link *http://tinyurl.com/23aod4n Thank you for the feedback Radhouane * 2011/1/3 Rick Frausto > Hello Radhouane, > > As a new entrant into th ...
written 8.9 years ago by Radhouane Aniba240
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Comment: C: Idea that needs feedback
... Thanks guys for your positive and encouraging feedback Could you please (if you did not filled it already) fill this form http://bit.ly/eKwSxNand send it to your collaborators friends and people you know working with R/Bioc. Hopefully a first version of the platform will be available in mid januar ...
written 9.0 years ago by Radhouane Aniba240
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Comment: C: Idea that needs feedback
... Thank you all for your feedback, I want more of course don't hesitate to reply to this thread. In order to get things more organized may be you can take a few moment filling this small form https://spreadsheets.google.com/viewform?formkey=dGpuSEk2ZlRRa2l2MWxXU GdIQzBjelE6MQ Thank you very much Ra ...
written 9.0 years ago by Radhouane Aniba240

Latest awards to Radhouane Aniba

Popular Question 3.6 years ago, created a question with more than 1,000 views. For Plotting segment of Granges intervals
Popular Question 3.6 years ago, created a question with more than 1,000 views. For BSgenome installation error

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