User: Barah

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Barah20
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Posts by Barah

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GEOquery download error
... I have tried to download GEO dataset GSE16146 using GEOquery library. It is a two channel printed array containing 83 samples. My aim is to extract the expression matrix for the 83 samples. The following error occurs- > library('GEOquery') >gseGSE16146 <- getGEO('GSE16146', GSEMatrix=TRUE ...
geoquery gse geoquery error message geo written 11 weeks ago by Barah20
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Comment: C: Converting list to a matrix
... Thanks Sean.. On Tue, Apr 12, 2011 at 3:10 PM, Sean Davis wrote: > On Tue, Apr 12, 2011 at 8:54 AM, pankaj borah > wrote: > > I have a list ( L) of 63 objects and each object has 30800 variables. > > > >>str (L) > > > > List of 63 > > $ objec1 : num ...
written 6.6 years ago by Barah20
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Comment: C: Converting list to a matrix
... Thanks Carlos, It worked. I had to transpose it. t(do.call( rbind, a )) Thanks a lot, Pankaj On Tue, Apr 12, 2011 at 3:09 PM, Carlos J. Gil Bellosta < cgb@datanalytics.com> wrote: > Hello, > > Try this: > > a <- list( a = 1:4, b = 2:5 ) > do.call( rbind, a ) > > ...
written 6.6 years ago by Barah20

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