User: Richard Student

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30
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New User
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Last seen:
6 years, 5 months ago
Joined:
6 years, 6 months ago
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r****************@gmail.com

Posts by Richard Student

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RMA (affy) followed by SAM (samr)
... Hi, I have already analyzed some gene expression data using RMAExpress, writing to a tab-delimited file and then using the SAM plugin for MS Excel. I had great results and didn't have to use R at all. Now I would like to repeat the process using R. I don't really understand how to work with eSet ...
rae230a rae230b cdf affy process written 6.5 years ago by Richard Student30 • updated 6.5 years ago by Holger Schwender900
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Creating a figure showing Affy probe-set alignments along a small segment of chromosome
... Dear Bioconductor mailing list, If I have some CSV data in a file like this : Probe Set ID,Alignment Start,Alignment End,Strand,Gene Symbol 1380054_at,167415761, 167416381,+,Phactr3 1368499_at,167437521,167502083,-,Sycp2 1378270_at,167504376,167504858,+,Ppp1r3d 1373656_at,167505691,167506150,-,Ppp ...
probe graph written 6.5 years ago by Richard Student30 • updated 6.5 years ago by Sean Davis21k
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Creating a graph showing Affy probe-set alignments along a small segment of chromosome
... Dear Bioconductor mailing list, If I have some CSV data in a file like this : Probe Set ID,Alignment Start,Alignment End,Strand,Gene Symbol 1380054_at,167415761,167416381,+,Phactr3 1368499_at,167437521,167502083,-,Sycp2 1378270_at,167504376,167504858,+,Ppp1r3d 1373656_at,167505691,167506150,-,Ppp1 ...
probe graph written 6.5 years ago by Richard Student30 • updated 6.5 years ago by Steve Lianoglou12k

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