User: s0uchi02

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s0uchi0230
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16 years ago
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16 years, 1 month ago
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s*******@louisville.edu

Posts by s0uchi02

<prev • 3 results • page 1 of 1 • next >
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Probe Cell
... Hello. I am using "affy" to process HG_U95Av2 chip. I want to know how each spot (probe cell) is aligned on a chip. When I read in a data using (Data <- ReadAffy( )) and write out to a file, each spot is numbered from 1 to 409600. How can I determine probe cells and their corresponding probe ...
probe process written 16.0 years ago by s0uchi0230 • updated 16.0 years ago by Park, Richard220
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Clustering method
... Hi all, I have a question about analyzing Affymetrix data. I used "affy" package to normalize Affymetrix data (RMA, MAS5.0, and Li and Wong methods). I want to use hierarchical clustering method to cluster the normalized data according to experiments and genes. What would be a good software to use ...
clustering written 16.1 years ago by s0uchi0230
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Question about MM > PM
... Hello. I have a question about MM > PM. In the "Textual descrtion of affy," it is stated that if the following command is used: > mean(mm(Dilution) > pm(Dilution)) [1] 0.2746048 Is this 0.2746048 % or 27.46048% of the MM are larger than PM? Thank you a lot in advance, best Shizuka ...
affy written 16.1 years ago by s0uchi0230 • updated 16.1 years ago by Wolfgang Huber13k

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