User: annaick.carles

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Posts by annaick.carles

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Answer: A: makeTranscriptDbFromBiomart for Arabidopsis thaliana (plants_mart_10)
... Hi Marc, many thanks for your fast reply. I managed to make it working by using another machine which has direct access to the internet (not via proxy). --------------------------------------------- > txdb_At<-makeTranscriptDbFromBiomart(biomart="plants_mart_10",dataset= "athaliana_eg_gene ...
written 8.2 years ago by annaick.carles20
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makeTranscriptDbFromBiomart for Arabidopsis thaliana (plants_mart_10)
... Dear Bioconductor mailing list, i need to get the length of genes in Arabidopsis thaliana in order to use the R package 'goseq'. Since Arabidopsis thaliana is not in the native 'goseq' database, I first tried to get a 'transcriptDb' object as suggested in the documentation of 'goseq', with 'makeTra ...
arabidopsis thaliana biomart written 8.2 years ago by annaick.carles20

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