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427
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Comment:
Comment: lfcSE always positive. Does this make sense?
12 weeks ago
Sean Davis
21k
0
votes
0
replies
3.5k
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Comment:
Comment: strange results from differential methylation analysis using limma
22 months ago
Sean Davis
21k
0
votes
1
reply
2.0k
views
Comment:
Comment: GEO series matrix empty
2.1 years ago
Sean Davis
21k
1
vote
1
reply
2.0k
views
Comment:
Comment: GEO series matrix empty
2.1 years ago
Sean Davis
21k
0
votes
0
replies
1.4k
views
Comment:
Comment: Reading large file (15GB) in R
2.1 years ago
Sean Davis
21k
1
vote
1
reply
2.0k
views
Comment:
Comment: GEO series matrix empty
2.1 years ago
Sean Davis
21k
0
votes
1
reply
1.4k
views
Comment:
Comment: Reading large file (15GB) in R
2.2 years ago
Sean Davis
21k
0
votes
1
reply
852
views
Comment:
Comment: Error in loading data set
2.2 years ago
Sean Davis
21k
0
votes
0
replies
1.1k
views
Comment:
Comment: GEOquery returning NAs as probe names
2.2 years ago
Sean Davis
21k
0
votes
1
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3.7k
views
Comment:
Comment: GEOquery run into problem with Sys.setenv("VROOM_CONNECTION_SIZE")
2.3 years ago
Sean Davis
21k
0
votes
1
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3.7k
views
Comment:
Comment: Installing Bioconductor
2.3 years ago
Sean Davis
21k
0
votes
2
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3.7k
views
Comment:
Comment: GEOquery run into problem with Sys.setenv("VROOM_CONNECTION_SIZE")
2.3 years ago
Sean Davis
21k
0
votes
0
replies
2.3k
views
Comment:
Comment: GEO RNASeq data query
2.3 years ago
Sean Davis
21k
0
votes
1
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3.7k
views
Comment:
Comment: GEOquery run into problem with Sys.setenv("VROOM_CONNECTION_SIZE")
2.3 years ago
Sean Davis
21k
0
votes
1
reply
3.7k
views
Comment:
Comment: GEOquery run into problem with Sys.setenv("VROOM_CONNECTION_SIZE")
2.3 years ago
Sean Davis
21k
1
vote
1
reply
1.2k
views
Comment:
Comment: 2 questions: why there is nothing for file_ids? How could I generate a manifest
2.6 years ago
Sean Davis
21k
0
votes
1
reply
6.0k
views
Comment:
Comment: Accessing Public Genomic Data from Bioconductor
2.7 years ago
Sean Davis
21k
0
votes
0
replies
1.3k
views
Comment:
Comment: when using getGEO() from GEOquery, an error happened : a file does not exist
3.2 years ago
Sean Davis
21k
0
votes
1
reply
1.3k
views
Comment:
Comment: when using getGEO() from GEOquery, an error happened : a file does not exist
3.2 years ago
Sean Davis
21k
0
votes
0
replies
1.3k
views
Comment:
C: GEOquery: preprocessing log of imported data
3.8 years ago
Sean Davis
21k
0
votes
1
reply
1.1k
views
Comment:
C: Annotation issue while analyzing processed Affymetrix Human Exon 1.0 ST Arrays f
4.0 years ago
Sean Davis
21k
0
votes
0
replies
849
views
Comment:
C: Annotation Using GEOquery
4.4 years ago
Sean Davis
21k
0
votes
0
replies
1.0k
views
Comment:
C: GEOquery and Feature data
4.4 years ago
Sean Davis
21k
0
votes
0
replies
2.8k
views
Comment:
C: GEOquery: HTTP error 403
4.9 years ago
Sean Davis
21k
1
vote
0
replies
2.8k
views
Comment:
C: GEOquery: HTTP error 403
4.9 years ago
Sean Davis
21k
0
votes
0
replies
2.8k
views
Comment:
C: GEOquery: HTTP error 403
4.9 years ago
Sean Davis
21k
0
votes
0
replies
1.2k
views
Comment:
C: edgeR. Known cancer genes are not differentially expressed?
5.3 years ago
Sean Davis
21k
1
vote
1
reply
2.0k
views
Comment:
C: geGeo error - Error in .subset2(x, i) : subscript out of bounds
5.3 years ago
Sean Davis
21k
0
votes
0
replies
1.5k
views
Comment:
C: GEOquery:Get error sampleNames
5.3 years ago
Sean Davis
21k
0
votes
0
replies
1.2k
views
Comment:
C: GEOQuery bug, NCBI or package?
5.3 years ago
Sean Davis
21k
0
votes
1
reply
1.2k
views
Comment:
C: GEOQuery bug, NCBI or package?
5.3 years ago
Sean Davis
21k
0
votes
0
replies
1.5k
views
Comment:
C: GEOquery:Get error sampleNames
5.3 years ago
Sean Davis
21k
0
votes
1
reply
1.5k
views
Comment:
C: GEOquery:Get error sampleNames
5.3 years ago
Sean Davis
21k
1
vote
0
replies
1.5k
views
Comment:
C: Using GenomicDataCommons R package to identify cases with both DNA methylation a
5.4 years ago
Sean Davis
21k
0
votes
0
replies
1.5k
views
Comment:
C: Using GenomicDataCommons R package to identify cases with both DNA methylation a
5.4 years ago
Sean Davis
21k
0
votes
1
reply
1.5k
views
Comment:
C: Using GenomicDataCommons R package to identify cases with both DNA methylation a
5.4 years ago
Sean Davis
21k
0
votes
0
replies
3.6k
views
Comment:
C: Processing two-colour array data from GEO using limma when no raw data are avail
5.5 years ago
Sean Davis
21k
0
votes
0
replies
1.3k
views
Comment:
C: question about getGEO function
5.5 years ago
Sean Davis
21k
2
votes
0
replies
2.5k
views
Comment:
C: Using eset while parsing GSE file located in a path
5.6 years ago
Sean Davis
21k
0
votes
1
reply
2.5k
views
Comment:
C: Using eset while parsing GSE file located in a path
5.6 years ago
Sean Davis
21k
0
votes
0
replies
2.5k
views
Comment:
C: Using eset while parsing GSE file located in a path
5.6 years ago
Sean Davis
21k
0
votes
1
reply
1.6k
views
Comment:
C: Filtering the probe set ids from GSE file
5.6 years ago
Sean Davis
21k
1
vote
1
reply
2.3k
views
Comment:
C: Filtering Gene Symbols and Sample Description from GSE files of GEO
5.6 years ago
Sean Davis
21k
0
votes
1
reply
2.3k
views
Comment:
C: Filtering Gene Symbols and Sample Description from GSE files of GEO
5.6 years ago
Sean Davis
21k
0
votes
1
reply
2.3k
views
Comment:
C: Filtering Gene Symbols and Sample Description from GSE files of GEO
5.6 years ago
Sean Davis
21k
0
votes
1
reply
2.3k
views
Comment:
C: Filtering Gene Symbols and Sample Description from GSE files of GEO
5.6 years ago
Sean Davis
21k
0
votes
0
replies
1.4k
views
Comment:
C: GEOquery using keywords in R
5.8 years ago
Sean Davis
21k
0
votes
0
replies
3.1k
views
Comment:
C: How to check the read length for all the TCGA data samples in GDC?
5.9 years ago
Sean Davis
21k
2
votes
1
reply
3.1k
views
Comment:
C: How to check the read length for all the TCGA data samples in GDC?
6.0 years ago
Sean Davis
21k
2
votes
1
reply
3.1k
views
Comment:
C: How to check the read length for all the TCGA data samples in GDC?
6.0 years ago
Sean Davis
21k
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