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0
votes
1
reply
1.7k
views
Comment:
C: necessity of moderated t statistic and false discoveries for small predefined ge
11.9 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
834
views
cutoff for NUSE plot in oligo
Cancer
Cancer
12.1 years ago
Richard Friedman
★ 2.0k
0
votes
6
replies
6.9k
views
DeSeq vs current version of Cuffdiff
Sequencing
Bayesian
Cancer
DESeq
Sequencing
Bayesian
Cancer
DESeq
updated 12.1 years ago by
Stephen Turner
▴ 290 • written 12.1 years ago by
Richard Friedman
★ 2.0k
0
votes
1
reply
4.2k
views
Comment:
C: PCA to remove batch effect.
12.3 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
4.2k
views
Comment:
C: PCA to remove batch effect.
12.3 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
4.2k
views
Answer:
A: PCA to remove batch effect.
12.3 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
979
views
Answer:
A: some basic questions
12.3 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
916
views
Answer:
A: some basic questions
12.3 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
989
views
Comment:
C: which statistical test to perform?
12.4 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.6k
views
Comment:
C: objective criterion for identification of outlying arrays by pca
12.4 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
1.6k
views
Comment:
C: objective criterion for identification of outlying arrays by pca
12.4 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
1.6k
views
Comment:
C: objective criterion for identification of outlying arrays by pca
12.4 years ago
Richard Friedman
★ 2.0k
0
votes
10
replies
1.6k
views
objective criterion for identification of outlying arrays by pca
Bayesian
Cancer
Bayesian
Cancer
updated 12.4 years ago by
Vincent J. Carey, Jr.
6.7k • written 12.4 years ago by
Richard Friedman
★ 2.0k
0
votes
1
reply
1.1k
views
Comment:
C: Practical utilization of SQN in ST1.0 Gene normalization.
12.4 years ago
Richard Friedman
★ 2.0k
0
votes
3
replies
1.1k
views
Practical utilization of SQN in ST1.0 Gene normalization.
Bayesian
Cancer
oligo
Bayesian
Cancer
oligo
updated 12.4 years ago by
Tim Triche
★ 4.2k • written 12.4 years ago by
Richard Friedman
★ 2.0k
0
votes
0
replies
1.4k
views
NUSE and RLE PLOTS for ST1.0 Gene chips with oligo w/o 1st quantile line
Bayesian
Cancer
oligo
Bayesian
Cancer
oligo
12.4 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.1k
views
Answer:
A: affylmGUI annotations
12.6 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.1k
views
Pathway specific gene lists in SPIA
Bayesian
Cancer
Bayesian
Cancer
12.7 years ago
Richard Friedman
★ 2.0k
3
votes
0
replies
2.7k
views
Evidence-based guidelines for use the method="robust" option in lmFit
Microarray
Normalization
Bayesian
Regression
Cancer
limma
Microarray
Normalization
Cancer
12.9 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
2.7k
views
Comment:
C: Delta CT data distribution and cluster analyses; machine learning or other
12.9 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
2.7k
views
Answer:
A: Delta CT data distribution and cluster analyses; machine learning or other
12.9 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
2.7k
views
Answer:
A: Delta CT data distribution and cluster analyses; machine learning or other
12.9 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.3k
views
Comment:
C: Detection calls and LIMMA
13.1 years ago
Richard Friedman
★ 2.0k
0
votes
3
replies
1.3k
views
Comment:
C: Detection calls and LIMMA
13.1 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.3k
views
Answer:
A: Detection calls and LIMMA
13.1 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
985
views
st 1.0 gene quality measures
Cancer
Cancer
updated 13.2 years ago by
Davis, Wade
▴ 350 • written 13.2 years ago by
Richard Friedman
★ 2.0k
0
votes
1
reply
950
views
transformation for illumina methylation beta data prior to input to limma
Cancer
limma
Cancer
limma
updated 13.2 years ago by
Sean Davis
21k • written 13.2 years ago by
Richard Friedman
★ 2.0k
0
votes
1
reply
2.1k
views
Answer:
A: limma report logFC confidence interval?
13.2 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
629
views
Application of Method of Aryee et al to Illumina methylation Arrays
Microarray
Cancer
Microarray
Cancer
13.2 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
1.7k
views
Answer:
A: booklet on using R for biomedical statistics
13.3 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.8k
views
Comment:
C: oneChannelGUI
13.4 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.8k
views
Comment:
C: oneChannelGUI
13.4 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
1.8k
views
Comment:
C: oneChannelGUI
13.4 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
1.8k
views
Answer:
A: oneChannelGUI
13.4 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
576
views
Answer:
A: help with normalization
13.5 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
807
views
Answer:
A: AgiMicroRna rmaMicriRna call fails
13.6 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.2k
views
Answer:
A: AgiMicroRna and readMicroRnaFE
13.6 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.1k
views
Comment:
C: How to normalize one additional CEL file?
13.6 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
929
views
Answer:
A: package for pathway analysis
13.6 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.8k
views
Comment:
C: AgiMicroRNA and Extra columns in Agilent Mouse miRNA Microarray Release 12.0 G44
13.8 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
1.8k
views
Comment:
C: AgiMicroRNA and Extra columns in Agilent Mouse miRNA Microarray Release 12.0 G44
13.8 years ago
Richard Friedman
★ 2.0k
0
votes
3
replies
1.5k
views
identical output plots for NUSE AND RLE
GO
Cancer
affyPLM
GO
Cancer
affyPLM
updated 13.8 years ago by
Paolo Innocenti
▴ 320 • written 13.8 years ago by
Richard Friedman
★ 2.0k
0
votes
0
replies
1.5k
views
Comment:
C: identical output plots for NUSE AND RLE
13.8 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
1.0k
views
Error message with rmaMicroRna on mouse data in AgiMicroRNA
Cancer
probe
AgiMicroRna
Cancer
probe
AgiMicroRna
updated 13.8 years ago by
Pedro López Romero
▴ 360 • written 13.8 years ago by
Richard Friedman
★ 2.0k
0
votes
0
replies
797
views
Error in cvArray in AgiMicroRNA
Cancer
probe
Cancer
probe
13.8 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
679
views
mvaPlots of RMA normalized data in AgiMicroRNA
Cancer
AgiMicroRna
Cancer
AgiMicroRna
13.8 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
547
views
Error Message upon filtering in AgiMicroRNA of RMA normalized object.
Cancer
Cancer
13.8 years ago
Richard Friedman
★ 2.0k
0
votes
2
replies
850
views
Error message with rmaMicroRna on mouse data in AgiMicroRNA
Cancer
probe
Cancer
probe
updated 13.8 years ago by
Pedro López Romero
▴ 360 • written 13.8 years ago by
Richard Friedman
★ 2.0k
0
votes
0
replies
584
views
Answer:
A: Questions about calculate gene signal
13.8 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.8k
views
Answer:
A: AgiMicroRNA and Extra columns in Agilent Mouse miRNA Microarray Release 12.0 G44
13.8 years ago
Richard Friedman
★ 2.0k
200 results • Page
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