User: Anthony Bosco

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Anthony Bosco500
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15 years, 11 months ago
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a*******@ichr.uwa.edu.au

Posts by Anthony Bosco

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Comment: C: platform design info for primeview arrays for oligo package
... Thanks James, Best regards, Anthony -----Original Message----- From: James W. MacDonald [mailto:jmacdon@uw.edu] Sent: Tuesday, 18 February 2014 10:56 PM To: Anthony Bosco Cc: bioconductor at r-project.org Subject: Re: [BioC] platform design info for primeview arrays for oligo package Hi Anthony, ...
written 5.7 years ago by Anthony Bosco500
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platform design info for primeview arrays for oligo package
... Dear BioC, Is there a platform design info package available for Affymetrix PrimeView arrays? Best regards, Anthony [[alternative HTML version deleted]] ...
written 5.7 years ago by Anthony Bosco500 • updated 5.7 years ago by James W. MacDonald51k
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Comment: C: org.Hs.eg.db namespace issue
... Hi Dan, The issue is now resolved.. Thank you very much. Best regards, Anthony From: dandante@gmail.com [mailto:dandante@gmail.com] On Behalf Of Dan Tenenbaum Sent: Thursday, 4 July 2013 10:43 AM To: Anthony Bosco Cc: bioconductor@r-project.org Subject: Re: [BioC] org.Hs.eg.db namespa ...
written 6.3 years ago by Anthony Bosco500
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org.Hs.eg.db namespace issue
... Hi, I recently updated the org.Hs.eg.db package but I cannot load it into R session? Does anyone know how to resolve this issue? Loading required package: DBI Error : .onLoad failed in loadNamespace() for 'org.Hs.eg.db', details: call: get(name, envir = asNamespace(pkg), inherits = FALS ...
written 6.3 years ago by Anthony Bosco500 • updated 6.3 years ago by Dan Tenenbaum60
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hugene10stv1cdf
... Dear Christoph, What not do the data preprocessing step in Expression Consol software, then export the data with annotations as a text file, then import into R for further analysis. To import data into R, you can use read.delim or read.csv functions. Best regards, Anthony -----Original Messa ...
preprocessing cdf written 9.5 years ago by Anthony Bosco500
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Answer: A: is.atomic error with betr function
... Hi Martin, I have figured out that the atomic error was due to having a different number of replicates at each time point. Best regards, Anthony Bosco From: Martin Aryee To: bioconductor@stat.math.ethz.ch Cc: abosco@arc.arizona.edu Sent: Sat, 13 February, 2010 4:24:39 PM Subject: Re: [BioC] ...
written 9.7 years ago by Anthony Bosco500
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: Affy Human Gene ST1.0 cdf
... An embedded and charset-unspecified text was scrubbed... Name: not available Url: https://stat.ethz.ch/pipermail/bioconductor/attachments/20070613/ 9b5630fe/attachment.pl ...
written 12.4 years ago by Anthony Bosco500
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Gene set analysis/Global test with 3 replicates
... Hi, I would like to perform gene set analysis using global test or another method (suggestions?) but I only have 3 biological replicates for each condition and I am not sure which method is the most powerful to use in this case. Also, has anyone compiled Biocarta pathways into gene lists for gene ...
pathways written 13.3 years ago by Anthony Bosco500 • updated 13.3 years ago by Oosting, J. PATH550
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Reference for Volcano plot
... Try this review.... Cui X, Churchill GA. Statistical tests for differential expression in cDNA microarray experiments. Genome Biol. 2003;4(4):210. PMID: 12702200 regards Anthony ...
written 13.3 years ago by Anthony Bosco500
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justRMA and custom CDF
... Hi , I would like to analyse a large Affymetrix dataset with justRMA function and a custom CDF. Is this possible? regards Anthony ...
cdf written 13.8 years ago by Anthony Bosco500 • updated 13.8 years ago by James W. MacDonald51k

Latest awards to Anthony Bosco

Popular Question 5.7 years ago, created a question with more than 1,000 views. For Display scale on hclust heatmap
Popular Question 5.7 years ago, created a question with more than 1,000 views. For org.Hs.eg.db namespace issue
Popular Question 5.7 years ago, created a question with more than 1,000 views. For : Clustering with Diana
Popular Question 5.7 years ago, created a question with more than 1,000 views. For venn diagram in R
Popular Question 5.7 years ago, created a question with more than 1,000 views. For Resize plots to display axis labels

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