User: hettling

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hettling60
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Posts by hettling

<prev • 6 results • page 1 of 1 • next >
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Hyperdraw: bidirectional edges
... Hello, I have another question about the Hyperdraw package. I would like to draw bidirectional edges with arrows on both sides of the edge. I took the example from the vignette, below my failed naive attempt: ## dh1 <- DirectedHyperedge("A", "B", "R1") dh1r <- DirectedHyperedge("B", "A", "R ...
hyperdraw written 6.6 years ago by hettling60 • updated 6.6 years ago by Paul Murrell30
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Comment: C: hyperdraw: How can I control node label font size?
... Hello, thank you for the quick reply, the workaround that you suggested works very well for me! Kind Regards Hannes On Wed, 2013-05-08 at 09:43 +1200, Paul Murrell wrote: > Hi > > This is a bug (or "missing feature") in 'hyperdraw'. > I will update the package with a fix, but in the ...
written 6.6 years ago by hettling60
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hyperdraw: How can I control node label font size?
... Hello, I am using the Hyperdraw package and am wondering how I can set the font size for the labels of my node? I took the example from the vignette: ## dh1 <- DirectedHyperedge("A", "B", "R1") dh2 <- DirectedHyperedge(c("A", "B"), c("C", "D"), "R2") dh3 <- DirectedHyperedge("D", "E", "R ...
hyperdraw written 6.6 years ago by hettling60 • updated 6.6 years ago by Paul Murrell30
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Comment: C: rsbml: problem writing a model to file
... I found another small problem with writing my model to file: Whenever there are any parentheses in the math expression in a KineticLaw, the tag in the written SBML file is empty. Even for a very simple reaction like: re<-new("Reaction",id="r1",name="r1",kineticLaw=new("KineticLaw",math= as.exp ...
written 7.7 years ago by hettling60
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Comment: C: rsbml: problem writing a model to file
... Dear Michael, Thanks a lot for your help! I got it to work with the development version of the package and libsbml 5. The package does not compile anymore with libsbml 4; I guess the package uses the development version of SOSlib, which says it only works with libsbml 3.0.2 or the latest devel ver ...
written 7.7 years ago by hettling60
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rsbml: problem writing a model to file
... Dear all, I have some trouble with SBML export using the package 'rsbml'. The following example of saving a very simple model to file gives an error on my machine: require('rsbml') com<-new("Compartment",id="default_compartment",name="default_compartm ent",size=1) sp<-new("Species",id="s1",n ...
rsbml written 7.7 years ago by hettling60 • updated 7.7 years ago by Michael Lawrence11k

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