User: wenhuo hu

gravatar for wenhuo hu
wenhuo hu200
Reputation:
200
Status:
Trusted
Location:
United States
Last seen:
3 months, 3 weeks ago
Joined:
6 years, 5 months ago
Email:
h*******@gmail.com

Posts by wenhuo hu

<prev • 23 results • page 1 of 3 • next >
0
votes
1
answer
84
views
1
answer
gviz: DataTrack: histogram like barplot baseline changed to most negative values when all score is negative
... I am plotting by Gviz pacckage. I need to get a barplot for a range, for example, from chr1:1-100, with value/score 40, I will need a bar with the hight of 40. It works by choosing type='histogram' when the value is positive. It also works when there are scores mixed with positive and negative value ...
gviz written 3 months ago by wenhuo hu200 • updated 3 months ago by Robert Ivanek530
0
votes
5
answers
960
views
5
answers
Answer: A: package or namespace load failed for TCGAbiolinks
... Just in case someone is still bothered by this: Install the TCGAbiolinks from the github solved this problem. It applears github has the more updated version.  ...
written 11 months ago by wenhuo hu200
0
votes
5
answers
971
views
5
answers
Answer: A: ChIPseeker: covplot function: error with some ENCODE data sets
... It works right now if this: install_github("GuangchuangYu/ChIPseeker") Thanks man. ...
written 3.4 years ago by wenhuo hu200
0
votes
0
answers
1.3k
views
0
answers
Comment: A: Problems during the installation of AnnotationDbi and pasilla
... I got the similar problem when install IRange ...
written 3.9 years ago by wenhuo hu200
0
votes
1
answers
1.0k
views
1
answers
Answer: A: Unable to create venndiagram using VennDiagram 1.5.1 package
... Though I can not what exactly this happened to you. It seems the number might be miscalculated according the error message. I used use venn.diagram function, this works very elegant. On Fri, Nov 9, 2012 at 11:22 AM, jay kumar wrote: > Dear Members > > I am trying to create a venn diagra ...
written 5.9 years ago by wenhuo hu200
0
votes
1
answers
572
views
1
answers
Comment: C: edgeR multifactorial design: confusing BCV plot
... Hi Natasha, I have been working on RNA-seq data from small sample numbers of small cell numbers. It turned out the similar results you got for the BCV plot. In my situation, there was an extra PCR step during processing the samples. I was speculating if this step of PCR amplification might increase ...
written 6.0 years ago by wenhuo hu200
0
votes
2
answers
535
views
2
answers
Comment: C: edgeR query
... Hi Shravanthi , I suggest you read through the edgeR manual. If you are new to R, then you probably need to read through the R manual. Best, Wenhuo On Tue, Sep 4, 2012 at 7:39 AM, Alyaa Mahmoud wrote: > read.table or read.delim > > there are many ways to determine up/down regulated g ...
written 6.1 years ago by wenhuo hu200
0
votes
2
answers
2.2k
views
2
answers
Answer: A: Warning: unable to access index for repository http://brainarray.mbni.med.umich.
... Hi, I never try to install all packages at one time. If you can install individual package? If you can, then your problem is unlikely of connection problem or access limitation. Wen On Jul 17, 2012 8:44 PM, "Peng Yu" wrote: > Hi, > > I get a warning when I try to install a bioc package. ...
written 6.2 years ago by wenhuo hu200
0
votes
1
answers
706
views
1
answers
Comment: C: Kaplan Meier curve
... Thank Susan and Heidi for your help. The space in the data were introduced by mistake when I trying to give a simple example of my data. Sorry for this. I got the points to interpretate such data. This is the best way to present observations of partially alive, since we don't know when and by what ...
written 6.3 years ago by wenhuo hu200
0
votes
1
answer
706
views
1
answer
Kaplan Meier curve
... Hi -- I am trying the survival package to draw kaplan meier curve but returned with unexpected result. here is my data: d, status: 1 mean died, 0 means still alive. gene status days 1 ko 1 81 2 ko 1 119 3 ko 1 92 4 ctrl 1 19 5 ctrl 1 15 6 ko ...
survival written 6.3 years ago by wenhuo hu200 • updated 6.3 years ago by Heidi Dvinge2.0k

Latest awards to wenhuo hu

Popular Question 2.2 years ago, created a question with more than 1,000 views. For supervised & unsupervised analysis of samples of microarray data

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 235 users visited in the last hour