User: Ed Schwalbe

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Ed Schwalbe20
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5 years, 7 months ago
Joined:
6 years, 4 months ago
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e**********@newcastle.ac.uk

Posts by Ed Schwalbe

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Conversion of minfi format MethylSet to methyAnalysis format MethyGenoSet
... Dear List, I have preprocessed my 450k methylation array data using minfi and have identified differentially methylated probes in my cancer dataset. I would like to take advantage of the nice position-dependent/gene- focussed methylation heatmaps available in the methyAnalysis package but am unsur ...
cancer charm minfi methyanalysis written 5.6 years ago by Ed Schwalbe20
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Copy Number Analysis across multiple SNP array plaforms
... Dear list, I have SNP array data run on three platforms: Affymetrix SNP6 (n=~250), Illumina OmniExpress (fresh frozen DNA) (n=12), Illumina OmniExpress FFPE (n=48). Since the cancer I work on is comparatively rare, many of our diagnostic samples are available only as paraffin blocks, so the arriva ...
snp cancer crlmm ffpe written 6.4 years ago by Ed Schwalbe20 • updated 6.4 years ago by Djork Clevert210

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