User: Oleg Mayba

gravatar for Oleg Mayba
Oleg Mayba20
Reputation:
20
Status:
New User
Location:
United States
Last seen:
6 months ago
Joined:
6 years, 9 months ago
Email:
m*********@gene.com

Posts by Oleg Mayba

<prev • 4 results • page 1 of 1 • next >
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Comment: C: Limma example where one comparison gives different results depending on the matr
... Thanks for the detailed reply!  Indeed, ensuring that the change propagates properly to all of the functionality supported by limma seems like quite an undertaking.    ...
written 6 months ago by Oleg Mayba20
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Comment: C: Limma example where one comparison gives different results depending on the matr
...     Hi, Gordon  I just wanted to clarify a bit the technical side of the issue. I apologize if this has also been answered before, and please feel free to point me to the existing answer, if one exists. If I understand the code correctly, the problem arises in limma::contrasts.fit() in the follow ...
written 6 months ago by Oleg Mayba20
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Comment: C: nearest() for GRanges
... Thanks, Valerie Much appreciated! Oleg. On Wed, Jun 20, 2012 at 5:20 PM, Cook, Malcolm wrote: > Hi Valerie, > > Very glad you found and fixed the root cause. > > I don't know the overhead it would take for you, but, this being a > regression, might you consider fixing in Bioco ...
written 6.8 years ago by Oleg Mayba20
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nearest() for GRanges
... Hi, I just noticed that a piece of logic I was relying on with GRanges before does not seem to work anymore. Namely, I expect the behavior of nearest() with a single GRanges object as an argument to be the same as that of IRanges (example below), but it's not anymore. I expect nearest(GR1) NOT to ...
iranges written 6.8 years ago by Oleg Mayba20 • updated 6.8 years ago by Martin Morgan ♦♦ 23k

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