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Comment: C: cn.mops on CRAM files
4.9 years ago Günter Klambauer ▴ 540
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920
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Answer: A: cn.mops on CRAM files
4.9 years ago Günter Klambauer ▴ 540
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1.2k
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Answer: A: mosdepth output into cn.mops?
5.1 years ago Günter Klambauer ▴ 540
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936
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Answer: C: tumor vs control: multiple samples
5.3 years ago Günter Klambauer ▴ 540
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4.4k
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Answer: A: cn.MOPs: Error in value[[3L]](cond) :
5.8 years ago Günter Klambauer ▴ 540
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4.4k
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Answer: A: cn.MOPs: Error in value[[3L]](cond) :
5.8 years ago Günter Klambauer ▴ 540
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Comment: C: Doubt about WL in cn.mops
5.8 years ago Günter Klambauer ▴ 540
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1.5k
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Answer: A: Doubt about WL in cn.mops
5.8 years ago Günter Klambauer ▴ 540
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872
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Answer: A: cn.mops: interpreting output when returnPosterior=TRUE
6.0 years ago Günter Klambauer ▴ 540
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1.0k
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Answer: A: best way to normalize for differences in sample read depth: normalize genome vs
6.1 years ago Günter Klambauer ▴ 540
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Answer: A: Error with plotting with target sequencing data
6.2 years ago Günter Klambauer ▴ 540
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1.4k
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Comment: C: Error when use getSegmentReadCountsFromBAM
6.2 years ago Günter Klambauer ▴ 540
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2.5k
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Answer: A: Cn.mops error: Error in if (sum(rds.counts) == 0) { : missing value where TR
6.2 years ago Günter Klambauer ▴ 540
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1.4k
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Comment: C: Error when use getSegmentReadCountsFromBAM
6.2 years ago Günter Klambauer ▴ 540
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1.4k
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Answer: A: Error when use getSegmentReadCountsFromBAM
6.2 years ago Günter Klambauer ▴ 540
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2.5k
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Answer: A: Cn.mops error: Error in if (sum(rds.counts) == 0) { : missing value where TR
6.3 years ago Günter Klambauer ▴ 540
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1.4k
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Answer: A: cn.MOPs issue with "Error in if (all(segMedianT == 0))"
6.3 years ago Günter Klambauer ▴ 540
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1.3k
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Comment: C: Is cn.mops can be used for detecting CNV for targeted sequencing of 8M region
6.4 years ago Günter Klambauer ▴ 540
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1.3k
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Answer: A: Is cn.mops can be used for detecting CNV for targeted sequencing of 8M region
6.4 years ago Günter Klambauer ▴ 540
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1.5k
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Comment: C: about the runs with cn.mops
6.6 years ago Günter Klambauer ▴ 540
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1.5k
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Answer: A: about the runs with cn.mops
6.6 years ago Günter Klambauer ▴ 540
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1.5k
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Comment: C: about the runs with cn.mops
6.6 years ago Günter Klambauer ▴ 540
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1.6k
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Answer: A: cn.MOPS - reporting log normalized read counts as table
6.8 years ago Günter Klambauer ▴ 540
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1.0k
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Answer: A: How to combine CNVDetectionResult objects in cn.mops package
6.8 years ago Günter Klambauer ▴ 540
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1.4k
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Answer: A: using cn.MOPS on WES data GERMLINE-TUMOR
6.8 years ago Günter Klambauer ▴ 540
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1.1k
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Answer: A: getReadCountsFromBAM and paired-end reads
6.8 years ago Günter Klambauer ▴ 540
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1
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1.3k
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Answer: A: Conflict in cnvr and cnvs result from cn.mops
6.9 years ago Günter Klambauer ▴ 540
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1.3k
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Answer: A: cn.mops encounter negative width problem
7.0 years ago Günter Klambauer ▴ 540
3
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1.1k
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Answer: A: R code for cn.mops -- if a chromosome does not have CNV ?
7.0 years ago Günter Klambauer ▴ 540
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1.5k
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Answer: A: R code for cn.mops
7.0 years ago Günter Klambauer ▴ 540
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1.3k
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Answer: A: cn.mops encounter negative width problem
7.0 years ago Günter Klambauer ▴ 540
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959
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Answer: A: which cn.mops function should I use
7.0 years ago Günter Klambauer ▴ 540
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1.1k
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Answer: A: cn.mops returning only "NA" as copy number
7.1 years ago Günter Klambauer ▴ 540
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1
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1.4k
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Comment: C: about an error in cn.MOPS : could not find symbol "recursive" in environment of
7.2 years ago Günter Klambauer ▴ 540
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2.3k
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Comment: C: How to use cn.mops to detect CNVs from Targeted DNA Sequencing data?
7.2 years ago Günter Klambauer ▴ 540
2
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1.3k
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Answer: A: parameter "refSeqName" in function "getReadCountsFromBAM"
7.2 years ago Günter Klambauer ▴ 540
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1
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2.3k
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Comment: C: How to use cn.mops to detect CNVs from Targeted DNA Sequencing data?
7.3 years ago Günter Klambauer ▴ 540
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1.4k
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Comment: C: Call CNV in population with large depth variance
7.3 years ago Günter Klambauer ▴ 540
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1.4k
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Answer: A: Call CNV in population with large depth variance
7.3 years ago Günter Klambauer ▴ 540
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1
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2.3k
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Comment: C: How to use cn.mops to detect CNVs from Targeted DNA Sequencing data?
7.3 years ago Günter Klambauer ▴ 540
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1
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2.3k
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Answer: A: How to use cn.mops to detect CNVs from Targeted DNA Sequencing data?
7.3 years ago Günter Klambauer ▴ 540
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840
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Answer: A: Input (X) data type is not numeric if read from GRanges obj
7.3 years ago Günter Klambauer ▴ 540
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1.2k
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Answer: A: cn.mops: NA in the output of referencecn.mops
7.4 years ago Günter Klambauer ▴ 540
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1.1k
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Answer: A: about cn.MOPS: paired vs unpaired
7.5 years ago Günter Klambauer ▴ 540
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861
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Answer: A: Suggestion: type of ExpLogFoldChange (sini)
7.5 years ago Günter Klambauer ▴ 540
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0
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1.4k
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Answer: A: No CNVs detected. Try changing "normalization", "priorImpact" or "thresholds".
7.6 years ago Günter Klambauer ▴ 540
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1.4k
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Answer: A: No CNVs detected. Try changing "normalization", "priorImpact" or "thresholds".
7.6 years ago Günter Klambauer ▴ 540
2
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0
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871
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Answer: A: Explain argument in fastseg function
7.6 years ago Günter Klambauer ▴ 540
2
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0
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1.3k
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Answer: A: parameter "refSeqName" in function "getReadCountsFromBAM"
7.7 years ago Günter Klambauer ▴ 540
0
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1
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896
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Answer: A: why there are multiple calls to cnmops C function?
7.7 years ago Günter Klambauer ▴ 540
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